AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu16g02620 | ATGGCTGGGAGGAACCGTGGACCGCCACTTCCAATGAAAGGTGCCCCACATGGTGGAATGCCACTTATTCACGAGCCACCGTATGGAAGGCATCTAGGCCCGATGCCCCATCCTGCGTTGCTTGAAGAGATGCGCGAAGCTGAGTTTGCAAGGGCTCACAGACCACTCCCACCTCACCCTGCTATATTTGAAGAACGGTTAGCAGTTCAACATCAGGACATTCAGGGGCTGTTGGTTGATAATCAACGGTTGGCTGCAACCCATGTTGCACTTAAGCAGGAGTTAGAAGCTGCACAACATGAGCTTCAACAAACCGATCATCATGCTAGAAACTTTTTGATGGAGAAGGATATGCAGATGCGAGAGTTGTATGAGAAGTCGGCCAAAATGGAACATGATCTTCATGGGGTTGAAGGCATGCGGGGCGAGCTTATGAAATTGCATGCTGATATTAAGGAATTGACTGCCACTCGTCAAAAGCTTACTGCTCAAGTTCAGGCCATGTCTCAAGATTTTGCTAGAGCTAATGCTGAATTGCAGCAAGTTCCAGCACTCAAGTCGGAAATTGGAGGGCTTAGGCAGGAACTGCAACGTGTGAGGGCTGCTATTGAACAAGAGAAAAAGGGGCATGCAGAGAACTATGAACATGGTCAAGTGATGGAGAAGAATTTACTTACTATGGCTCGTGAGTTGGAAAAGTTACGCGCTGAGATGGCTAATGCTGAAAAAAGGACACGTGCTGCAGCAGGGAATCCAAATCCTGGCTATAACACAAATTATGGCAATGTTGAAGCTAACTATGGAGTGAATCCGTATCCTGCTAATTACGGGATGAATTCTACTAATCAAATGAATCCTGTGCAGCCAGGTGCTGAAGGCTATCCTCAGTATGGACCTGGACCTGGATCGTGGGGCTCATATGATATGCAACGGGCTCAAGGGCACAGATAA | 951 | 47.63 | MAGRNRGPPLPMKGAPHGGMPLIHEPPYGRHLGPMPHPALLEEMREAEFARAHRPLPPHPAIFEERLAVQHQDIQGLLVDNQRLAATHVALKQELEAAQHELQQTDHHARNFLMEKDMQMRELYEKSAKMEHDLHGVEGMRGELMKLHADIKELTATRQKLTAQVQAMSQDFARANAELQQVPALKSEIGGLRQELQRVRAAIEQEKKGHAENYEHGQVMEKNLLTMARELEKLRAEMANAEKRTRAAAGNPNPGYNTNYGNVEANYGVNPYPANYGMNSTNQMNPVQPGAEGYPQYGPGPGSWGSYDMQRAQGHR | 316 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu16g02620 | 316 | Coils | Coil | 137 | 178 | - | - | |
| Hetu16g02620 | 316 | Coils | Coil | 193 | 213 | - | - | |
| Hetu16g02620 | 316 | Coils | Coil | 81 | 108 | - | - | |
| Hetu16g02620 | 316 | PANTHER | PROTEIN FLX-LIKE 2 | 1 | 308 | IPR040353 | - | |
| Hetu16g02620 | 316 | MobiDBLite | consensus disorder prediction | 287 | 316 | - | - | |
| Hetu16g02620 | 316 | Coils | Coil | 224 | 251 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu16g02620 | K27811 | protein FLX/FLXL |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 282013 | Hetu16g02620 | Hetu17g02510 | |
| 282986 | Hetu16g02620 | Hetu18g02781 | |
| 285397 | Hetu18g02781 | Hetu16g02620 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr16:139781379 | Hetu18g02781 | Hetu-Chr18:139888783 | dispersed | |
| Hetu | Hetu-Chr8:203943670 | Hetu16g02620 | Hetu-Chr16:139781379 | dispersed | |
| Hetu | Hetu-Chr9:211063049 | Hetu16g02620 | Hetu-Chr16:139781379 | dispersed | |
| Hetu | Hetu-Chr16:139781379 | Hetu17g02509 | Hetu-Chr17:132028836 | wgd | |
| Hetu | Hetu-Chr16:139781379 | Hetu17g02390 | Hetu-Chr17:126160452 | wgd | |
| Hetu | Hetu-Chr16:139781379 | Hetu18g02780 | Hetu-Chr18:139888430 | wgd |