AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu16g02632 ATGATCGGAGAAGTTGCAGCAGTTCCCAGATCATTGTGGGTTCATCCCCACACAAAAATCGGATCCCCAACTTCAATCTCAGTTTCAATCCCTACAAATCGAACCCATTTGGAAAAAATTAAAAATCCAGCAAGAAAATTATCCACGACCATCGCCAGCCCTTTGTTCTCTGTCAAAGCTGCTGCTGCTTCAGTGGAGTACGCCGAAGAACCCGCAACGAGTGTGAAATTTCCGACATCTTTGGATCTTCCTGGTTGCTCAACTGCATTATCTTTGATCGGAACAGGATTCAGGGAGAAAGTGTTTGCAATAATCGGTGTTAAGGTATATGCGGCGGGGCTATACCTGAACCCTGACATCTTGGATACTCTAGACGCCTGGAAAGGACGAAAAGCAGCTCAAATCGAGCAAGATTCGTCGTTGTTCGATTCAATTTATCAGGCTCCGTTAGAGAAATCTTTGCAGATCGTTCTGGTCAGAGATATTGATGGAAAAACTTTCTGGGATGCTCTAGACGAAGCTGTATCTCCGAGAATCAAATCACCCAATTCGACTGACAGAAACGCGCTCTCCGCCTTTCGTGCTATCTTTCAAGGTCGACCGTTAAAGAAAGGAACGTTCATATTCTTGACCTGGGTTGACCCTTCCAAAATGCTGGTTCACATATCAACTGACGGGAATCCATCGGCTGCAGAAGCTACAATCGAATCAGAAAATGTGACGTCTTCTCTCTTTGATGTATTTTTTGGGCGTGCACCGGTTTCTCCTACCTTAAAATCATCAATAAGCAACAGCTTGGCTTCGTTTCTCAAATAA 816 44.49 MIGEVAAVPRSLWVHPHTKIGSPTSISVSIPTNRTHLEKIKNPARKLSTTIASPLFSVKAAAASVEYAEEPATSVKFPTSLDLPGCSTALSLIGTGFREKVFAIIGVKVYAAGLYLNPDILDTLDAWKGRKAAQIEQDSSLFDSIYQAPLEKSLQIVLVRDIDGKTFWDALDEAVSPRIKSPNSTDRNALSAFRAIFQGRPLKKGTFIFLTWVDPSKMLVHISTDGNPSAAEATIESENVTSSLFDVFFGRAPVSPTLKSSISNSLASFLK 271
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu16g02632 271 Gene3D - 120 266 IPR016089 -
Hetu16g02632 271 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 30 270 - GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Hetu16g02632 271 Pfam Chalcone-flavanone isomerase 74 267 IPR016087 -
Hetu16g02632 271 SUPERFAMILY Chalcone isomerase 67 271 IPR036298 GO:0016872(InterPro)
Hetu16g02632 271 Gene3D - 77 248 IPR016088 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu16g02632 K01859 chalcone isomerase [EC:5.5.1.6]
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Event-related genes

Select Gene_1 Gene_2 Event_name
282019 Hetu16g02632 Hetu17g02520
282991 Hetu16g02632 Hetu18g02789
285402 Hetu18g02789 Hetu16g02632
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr16:140238973 Hetu17g02520 Hetu-Chr17:132608194 wgd
Hetu Hetu-Chr16:140238973 Hetu18g02789 Hetu-Chr18:140456900 wgd