AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu17g02325 | ATGGGTTGCAGAAATGGAGAAGAAGACAGATCATCATCGGGGGGTATTGTAAACGATGTGTTGCTGCTTACAAGCGTGTGTCTCATTGGGCTCTCCGTGGATGTGCACATCAAGGATGGCTCTGTTTATTCTGGAATCTTTCACACTGCCTCTGTCCACCACCCTTATGCTATTGTGTTGAAACGAGCAAAGATGACCAGGAAAGGGAGTTGTAATTCAAATGTGGCCAATGAGGAGGTCATCCGGACACTCATAATCCAATCAGAGGATCTTGTTCAAGTAGTCGCAAAGAAAGTAACAATTCCCGCAGATGGTTTTGCTGGTCATGGAACTGGAGATGAAACAGGGGCTGCTGCATGCTCTTTTCCTTCTAATGGAATTTCACTGACAGAATCAAATAAAACAATGACTGGCAAGTCAAATGTTGGTCAACCACACACTAATCAAACAAGATGCTCATCTGGAACTGAAAACGGGTTTGCTAACGGATGTAGACCTGTAAACACCATTCGATCAACCGATGCTCTTGAAGTAAAAGATATAGATGCGAAAGATTCAACAAAGAAGGAAAATTGTTTGAAGGGTCCAGATGATAACAGAAAGTATGGCAACCACACTAGCTCATCAGCTCCGAGTGAAACCGTCACTACAAAAATCTCAAATTCTAATCCAACCACTAAGGAGTTTAAACTTAACCCTGGTGCAAAGATATTTTCTCCATCATTTCCTAATAAAAGATCAGCAACCCCTCAAGCACTGGTGACGGGTACAAATCTTGTATACAATCCCGACACTCATCCTAGTGGCCTGGTAGCCGGCCCACAGCCCGAAGTTGAAATCAGCCCATTTGCTCCATGTTCCGTGCCCGTTAAGTTTGTTCCATATGCAGGCAATGATGTACACCATCCTCCTCCTATTGTTGGATATATGACAAACAGGAGTCAACCCGCCAGATACAGGTCATATCATCCTGTCCAAACAGCACCTACCTATGTCCAACCAAGCTCTCAGAATGTAATGGTTGGACGATTAGGGCCCGTTGTCTATGTTCATCCGGTTTCCCAAGACATGGTGCCGAGCACGAACAGCTTCTCCTCTGTTTTAACTCCACACCAACTCCATGTCCCTAAACACCAAGGAACCACGGCGGGTCAAGCGTTGCAACTATCACCATTTGTAGGTGGTCAGGCACCATATGTTTTGCCAGGCCACATTCCCATATCACAACTGCCTTACCCTGTCATCTCAATCCCCGCATCTAATGGCTTTTTAGTATCAAAATTTTCTTGA | 1290 | 44.81 | MGCRNGEEDRSSSGGIVNDVLLLTSVCLIGLSVDVHIKDGSVYSGIFHTASVHHPYAIVLKRAKMTRKGSCNSNVANEEVIRTLIIQSEDLVQVVAKKVTIPADGFAGHGTGDETGAAACSFPSNGISLTESNKTMTGKSNVGQPHTNQTRCSSGTENGFANGCRPVNTIRSTDALEVKDIDAKDSTKKENCLKGPDDNRKYGNHTSSSAPSETVTTKISNSNPTTKEFKLNPGAKIFSPSFPNKRSATPQALVTGTNLVYNPDTHPSGLVAGPQPEVEISPFAPCSVPVKFVPYAGNDVHHPPPIVGYMTNRSQPARYRSYHPVQTAPTYVQPSSQNVMVGRLGPVVYVHPVSQDMVPSTNSFSSVLTPHQLHVPKHQGTTAGQALQLSPFVGGQAPYVLPGHIPISQLPYPVISIPASNGFLVSKFS | 429 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu17g02325 | 429 | MobiDBLite | consensus disorder prediction | 135 | 154 | - | - | |
| Hetu17g02325 | 429 | MobiDBLite | consensus disorder prediction | 187 | 201 | - | - | |
| Hetu17g02325 | 429 | Pfam | Ataxin 2 SM domain | 18 | 97 | IPR025852 | - | |
| Hetu17g02325 | 429 | MobiDBLite | consensus disorder prediction | 187 | 224 | - | - | |
| Hetu17g02325 | 429 | MobiDBLite | consensus disorder prediction | 202 | 224 | - | - | |
| Hetu17g02325 | 429 | PANTHER | ATAXIN 2-RELATED | 156 | 386 | IPR045117 | GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu17g02325 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 283933 | Hetu17g02325 | Hetu18g02613 | |
| 284748 | Hetu18g02613 | Hetu17g02325 | |
| 410511 | Hetu17g02325 | Hetu31g00746 | |
| 410512 | Hetu17g02325 | Hetu31g00908 | |
| 410513 | Hetu17g02325 | Hetu32g00965 | |
| 410514 | Hetu17g02325 | Hetu33g00869 | |
| 410515 | Hetu17g02325 | Hetu33g01017 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3316554 | Hetu | Hetu17g02325 | Hetu-Chr17:120464847 | Hetu30g02899 | Hetu-Chr30:178216538 | |
| 3563229 | Hetu | Hetu16g02471 | Hetu-Chr16:129295771 | Hetu17g02325 | Hetu-Chr17:120464847 | |
| 3569320 | Hetu | Hetu17g02325 | Hetu-Chr17:120464847 | Hetu18g02613 | Hetu-Chr18:127850673 | |
| 3570537 | Hetu | Hetu17g02325 | Hetu-Chr17:120464847 | Hetu31g00908 | Hetu-Chr31:40841874 | |
| 3570616 | Hetu | Hetu17g02325 | Hetu-Chr17:120464847 | Hetu32g00965 | Hetu-Chr32:44612856 | |
| 3570737 | Hetu | Hetu17g02325 | Hetu-Chr17:120464847 | Hetu33g01017 | Hetu-Chr33:43292406 |