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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu17g02356 ATGCGGGCTAAAAACAGAAACAAAAGTGCGGTAGTTTTGCCTCAAAATTCCCCGACTGACCACATTTTTCGACGGCTAAATTCTTATGAAGGTGAAAGTCTCCTTCATCTTCTCAGTTCAATTCAGAGAGAAATTAAGTCAGCCAGATTTGCGGATCAATCGTTACCTCATAAAATTTGGCTCAAGGCCATTCTTATAGCAAGCGACTGTAATCCTCGAGGACTTACAAAGCATCTGCCAATCCTGGCCTCGTCCAGGGAAGTGCCTGTCATCTTTGTGAAAGACAAGACAGGTGGATCGTTTAAGTTGGGTGAAATTGTGAATTTGAAGACGGCTATGGCAATTGGAGTTAAAGCTAGAGGAAATTCAGTTAACAAGATGATAAGTGAGATTCTTGGAGGTAATGATTGTGGGCCCGCGAATGAAACAAATGACGAGGTGTTCATACAGAATCCACAAGCTTTGTTAGAAGACTAG 477 42.14 MRAKNRNKSAVVLPQNSPTDHIFRRLNSYEGESLLHLLSSIQREIKSARFADQSLPHKIWLKAILIASDCNPRGLTKHLPILASSREVPVIFVKDKTGGSFKLGEIVNLKTAMAIGVKARGNSVNKMISEILGGNDCGPANETNDEVFIQNPQALLED 158
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu17g02356 158 SUPERFAMILY L30e-like 62 131 IPR029064 -
Hetu17g02356 158 PANTHER OS07G0636400 PROTEIN 1 63 - -
Hetu17g02356 158 Gene3D - 24 146 IPR029064 -
Hetu17g02356 158 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 62 123 IPR004038 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu17g02356 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
283952 Hetu17g02356 Hetu18g02673
284767 Hetu18g02673 Hetu17g02356
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3563241 Hetu Hetu16g02512 Hetu-Chr16:131759007 Hetu17g02356 Hetu-Chr17:123111346
3569342 Hetu Hetu17g02356 Hetu-Chr17:123111346 Hetu18g02673 Hetu-Chr18:132339620
3569391 Hetu Hetu17g02356 Hetu-Chr17:123111346 Hetu18g02655 Hetu-Chr18:130460859