AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu17g02367 ATGGAGGGCGTTGATGCTAGTCACAAGTATGCTAAAGAATTACAAGTGGGTGTAAGAGTTGTACAAATGGCTTGTTCTCTTTGTCAGAAGCTGCAAAAGGGCTCGGTTGGTCCCAGCCCTGATCACGTTGTTTCGAAAGATGATGATTCACCTGTTACTGTTGCCGGTGCGTTTATTTTTTGGTTTGTTTATTGGAGTGTACAAGCAATGATTAGCTGGATGCTATCAGAATCTTTCGGTAGAGAAAACGTCTCAATTGTTGCAGAAGAAGATGCACAAACACTTTCTGATGATTCTGCCACAAGTTTATTGGCATCTGTGGTTGCAACCGTGAATGAAACTTTAGCCATGGCACCGCGTTTCGGTCTCAAGGGTCCAACCAAACCTCTTGGGGGTTCAGAAATTCTTGAAGCCATTAACCGCTGCAATTCAACTGGTGGTCCGGTTGGAAGACATTGGGTTCTTGACCCTGTTGACGGAACCCTAGGGTTTGTGCGTGGAGATCAGTACGCTGTCGCACTTGCGTTGATTGAAAACGGGCAAGTTGTGGTTGGGGTTCTTGGGTGCCCTAATTATTCGAGTAAAAGGAAATTGGCTAATAATTTAAGTGTACGGTCGGATTTATGGCAAGAAGGGTGTGTTATGTACACAAGTAAAGGTAGTGGTCAAGCTTGGATGCAACCACTGGTTCAGGGTCACGGGTCACTTGAATGGCCCAATTCGGCAAGCGTTATACGTGTTTCTTCCATTGATAATCCTGTTATGGCTACATTTTGTGAACCGGTCGAGAAAACTAACTCTAACCATTCTTATAGCGCTGGAATTGCTCACAGAGTAGGGCTTAGAAAGCAACCGTTGCGTGTGTATAGCATGGTAAAATATGCTGCAATCGCACGTGGAGATGCAGAGATATACATGAAGTTTGCAAAAGCTGGATACAAAGAAAAGATATGGGATCATGCTGCTGGGGTGGTAATCGTGGAGGAAGCTGGCGGGGTTGTGACGGATGCTGGCGGCCGGCCATTAGATTTCTCAAAAGGCGTGTATCTTGAAGGTCTCGACCGGGGAATTGTTGCGTGTTCTGGAGTGAATTTACATGAGAAAATCATAGGGGCCGTTTATGCAAGCTGGGATTCCTCTCATCTTTAA 1149 45.52 MEGVDASHKYAKELQVGVRVVQMACSLCQKLQKGSVGPSPDHVVSKDDDSPVTVAGAFIFWFVYWSVQAMISWMLSESFGRENVSIVAEEDAQTLSDDSATSLLASVVATVNETLAMAPRFGLKGPTKPLGGSEILEAINRCNSTGGPVGRHWVLDPVDGTLGFVRGDQYAVALALIENGQVVVGVLGCPNYSSKRKLANNLSVRSDLWQEGCVMYTSKGSGQAWMQPLVQGHGSLEWPNSASVIRVSSIDNPVMATFCEPVEKTNSNHSYSAGIAHRVGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGVYLEGLDRGIVACSGVNLHEKIIGAVYASWDSSHL 382
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu17g02367 382 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 10 380 IPR006239 GO:0006790(InterPro)|GO:0008441(InterPro)
Hetu17g02367 382 Gene3D - 246 376 - -
Hetu17g02367 382 Pfam Inositol monophosphatase family 70 374 IPR000760 -
Hetu17g02367 382 PANTHER PHOSPHATASE 5 378 IPR051090 GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER)
Hetu17g02367 382 CDD PAP-phosphatase 13 375 - -
Hetu17g02367 382 ProSitePatterns Inositol monophosphatase family signature 1. 153 166 IPR020583 -
Hetu17g02367 382 FunFam PAP-specific phosphatase HAL2-like 246 379 - -
Hetu17g02367 382 SUPERFAMILY Carbohydrate phosphatase 10 375 - -
Hetu17g02367 382 Gene3D - 8 235 - -
Hetu17g02367 382 ProSitePatterns Inositol monophosphatase family signature 2. 318 332 IPR020550 GO:0046854(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu17g02367 K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
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Event-related genes

Select Gene_1 Gene_2 Event_name
283956 Hetu17g02367 Hetu18g02680
284771 Hetu18g02680 Hetu17g02367
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr17:123780515 Hetu49g01569 Hetu-Chr49:68569809 dispersed
Hetu Hetu-Chr16:132487134 Hetu17g02367 Hetu-Chr17:123780515 wgd
Hetu Hetu-Chr17:123780515 Hetu18g02680 Hetu-Chr18:132934583 wgd