Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu17g02488 | ATGCCAGCATCAATTTTACTCTTAAAAATATCATCCATAACAATCACACCTAACCATCATCTTCAACCGGTTTATTCCGTCATCGTCACCGGCGGAACAAACCACTGCTACCACCAGTCCACCTCCTCTCCAATTATGTGGAAATACACATGGATCCCTATAATATTAACAATAATATATCTACAAACTAGCTTCACGAAACCTGAGTCAACCATCCACTACTCGCCTACTGTTATGAAATCCACGTGTCCTTCACCGGACCCTACCCTCAACCACCGTCCGATCATCGGAATTGTTAGTCATCCCGGCGACGGTGCTTCCGGCAGACTCAGTAATGCCACTAATGCTTCCTATATTGCTGCTTCCTATGTCAAGTTTGTTGAGTCTGCTGGTGCTAGGGTTATTCCGCTCATTTACAACGAACCGATTACTAATCTTCAAGCTAAGCTCAGTTTGGTCAACGGAGTGCTTTTTACCGGTGGATGGTCTAAGAGTGGCCTCTATTTTGATGTTATTGAGGGAATTTTCAAGCAAGTCTTGAAGAAGAATGATGAAGGTGAACATTTCCCATTGCTTGCAATATGCTTAGGATTTGAACTCCTAACGATGATTATTAGCAAAAACAATAACATCCTTGAAGACTTTAGTGCATCAGATCAAGCTTCTACACTCCAATTCATGAGGAACATTAATCTTGAAGAAACATTATTTCAAAGATTTCCTCCTGAGTTGATTGCAAAGTTGAGCACAGAATGCCTTGTGATGCAAAACCATAAATATGGTATATCACCAGAAACATTTCAAGGTAATACAGAACTGTGCAGCTTCTTCAAGATCTTAACCACCAGTGCCGACCAAAACGGCAAGGTATATGTGTCAACGGTTCAATCAGAAAGCTATCCCGTGACTGCTGTCCAGTGGCACCCAGAGAAAAATGCTTTTGAGTGGGGCTCATCGGAAATTCCACATTCAGACGATGCAATCCAAGTGACTCAACATGTTGCCAACTTTTTCATAAGTGAGGCTAGAAAATCGCTCAACAGACCGCCTGCTGAACAAGTGCTAGCTAACCTTATCTACAATTACAGCCCCACTTATTGTGGGACCGCCGGGAAAGGATATGATGAGGTTTACATCTTCTCCGAGATGGAAACGATTGCACGACTTTGA | 1170 | 42.56 | MPASILLLKISSITITPNHHLQPVYSVIVTGGTNHCYHQSTSSPIMWKYTWIPIILTIIYLQTSFTKPESTIHYSPTVMKSTCPSPDPTLNHRPIIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVIPLIYNEPITNLQAKLSLVNGVLFTGGWSKSGLYFDVIEGIFKQVLKKNDEGEHFPLLAICLGFELLTMIISKNNNILEDFSASDQASTLQFMRNINLEETLFQRFPPELIAKLSTECLVMQNHKYGISPETFQGNTELCSFFKILTTSADQNGKVYVSTVQSESYPVTAVQWHPEKNAFEWGSSEIPHSDDAIQVTQHVANFFISEARKSLNRPPAEQVLANLIYNYSPTYCGTAGKGYDEVYIFSEMETIARL | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu17g02488 | 389 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 109 | 324 | - | - | |
| Hetu17g02488 | 389 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 85 | 381 | IPR015527 | GO:0008242(InterPro) | |
| Hetu17g02488 | 389 | SUPERFAMILY | Class I glutamine amidotransferase-like | 94 | 379 | IPR029062 | - | |
| Hetu17g02488 | 389 | Pfam | Peptidase C26 | 94 | 310 | IPR011697 | GO:0016787(InterPro) | |
| Hetu17g02488 | 389 | FunFam | Folate gamma-glutamyl hydrolase | 90 | 381 | - | - | |
| Hetu17g02488 | 389 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 73 | 381 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) | |
| Hetu17g02488 | 389 | Gene3D | - | 89 | 381 | IPR029062 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu17g02488 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 282011 | Hetu16g02604 | Hetu17g02488 | |
| 283973 | Hetu17g02488 | Hetu18g02761 | |
| 284788 | Hetu18g02761 | Hetu17g02488 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr10:234438909 | Hetu17g02488 | Hetu-Chr17:130989033 | transposed | |
| Hetu | Hetu-Chr16:138418015 | Hetu17g02488 | Hetu-Chr17:130989033 | wgd | |
| Hetu | Hetu-Chr17:127163783 | Hetu17g02488 | Hetu-Chr17:130989033 | wgd | |
| Hetu | Hetu-Chr17:130989033 | Hetu18g02761 | Hetu-Chr18:138875620 | wgd |