AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu18g02612 ATGGACCCGGTGAGCCAAGAAGTGACGCCCGATGCCACACTTACTGCTCCTGAAAAGCGAAAACGTGGCCGCCCACGGAAGGATCCGAGTGAAAGACGGGTCAAAAAAGACCGTTCGCAAGCTGCTCGTATGCCTCCTGGTTTTGTACAGCTGACCAACAATGCTCCTCGAGTTGACCCGATAAATGATCCAACTGAAGTTATGGTTGGGCAGACTGTAACTGGTGTTGTTGAGGCAACTTTTGATGCAGGTTACCTGCTTGCGGTTAGGATCGGGAACTCAAAGATCACACTAAGGGGTGCGGTTTTCAAACCAGGCCACACAGCACCTGTGACACCTGAAAATGATGTAGCACCTCATGTTGAAATGATCAAAAGAACTGAAATTCCATTCCCAACAGAACTCCAACCCAAGCGTAGGCGTAAACGAAGATCAAAAGAAAAAAATATGCAGCTTGTTACTTATGTCGGGAACGGGTCAGACCCAGTGGATACAAATGCACCCTCAAAAACCAACTACGGGCTAGCCCCCTCAGTTGGTGGGAGAGGGACCATGGTCCCTGTTATTCTTCAACCAGCTAACCTATCAAACGGTTTATCCCACAACCAACCTGCACCTCATTTGCGGGCTTCACAAGGCAAGCCTGTGCACTCAGTTCTGCCATTGGCGGTATACCCACCAAATGGGTCAACAAGTCAACCGTCAGAGTCTCAAACTAGCTCCCAGTTTACGGTTCCACCCTCAGTGTCTGGAAATGAAAATGCTGCTTTTAAAAACGCTGAAGGGGGTCAAGCGCTAAAATCAAATGATGTGCAGGATCCAATTGTGAAAACAGAATCAGATGAGCCTCTTTTTGTTGAACCACTGCAAACCCGACACTTGGTTCATCATTTCCAGCCTCCACCAGGATTGGGAGGCGTGATGCAAGTCGGGACTGGGAGAATGACCGAGCTTTTACAGGCTGTTCAACAAAACATTGGGGATGACCAGGTTCCTAGAAACAGCGGACATCCAAGCACAAGTTGCAACGAAACTGGACAGCCAGGAAAGATGTAA 1056 48.67 MDPVSQEVTPDATLTAPEKRKRGRPRKDPSERRVKKDRSQAARMPPGFVQLTNNAPRVDPINDPTEVMVGQTVTGVVEATFDAGYLLAVRIGNSKITLRGAVFKPGHTAPVTPENDVAPHVEMIKRTEIPFPTELQPKRRRKRRSKEKNMQLVTYVGNGSDPVDTNAPSKTNYGLAPSVGGRGTMVPVILQPANLSNGLSHNQPAPHLRASQGKPVHSVLPLAVYPPNGSTSQPSESQTSSQFTVPPSVSGNENAAFKNAEGGQALKSNDVQDPIVKTESDEPLFVEPLQTRHLVHHFQPPPGLGGVMQVGTGRMTELLQAVQQNIGDDQVPRNSGHPSTSCNETGQPGKM 351
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu18g02612 351 MobiDBLite consensus disorder prediction 14 40 - -
Hetu18g02612 351 MobiDBLite consensus disorder prediction 225 255 - -
Hetu18g02612 351 MobiDBLite consensus disorder prediction 328 351 - -
Hetu18g02612 351 MobiDBLite consensus disorder prediction 220 255 - -
Hetu18g02612 351 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 345 IPR045881 -
Hetu18g02612 351 MobiDBLite consensus disorder prediction 1 48 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu18g02612 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
282954 Hetu16g02470 Hetu18g02612
283932 Hetu17g02324 Hetu18g02612
284747 Hetu18g02612 Hetu17g02324
285365 Hetu18g02612 Hetu16g02470
411261 Hetu18g02612 Hetu31g00909
411262 Hetu18g02612 Hetu32g00966
411263 Hetu18g02612 Hetu33g01018
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3320042 Hetu Hetu18g02612 Hetu-Chr18:127848329 Hetu32g02393 Hetu-Chr32:140863404
3564624 Hetu Hetu16g02470 Hetu-Chr16:129292323 Hetu18g02612 Hetu-Chr18:127848329
3569319 Hetu Hetu17g02324 Hetu-Chr17:120462507 Hetu18g02612 Hetu-Chr18:127848329
3572794 Hetu Hetu18g02612 Hetu-Chr18:127848329 Hetu31g00909 Hetu-Chr31:40848058
3572898 Hetu Hetu18g02612 Hetu-Chr18:127848329 Hetu32g00966 Hetu-Chr32:44623034
3572954 Hetu Hetu18g02612 Hetu-Chr18:127848329 Hetu33g01018 Hetu-Chr33:43298921