AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu1g00002 ATGTGGAAAATGGGGGTTTCAGATCGACAGATCCCCCCAAAACGATCCCCAAGAGCTTTTCGATCCGACATGGAATCACTTGCCAATGACAGTGGCGTGAGGGGTGAGGTTGACACGTCAGCACCGTTTGAGTCGGTTAAAGAGGCCGTGACCCGGTTCGGTGGAGTTGGGTTCTGGAAGCCCCATCAGAAGCAGCAGCAGCAGCATGTTCATCATTCTGAGAATGGAACTGAAGAAGAATTTAATGCTGCTAAAGCTGAAGAGCTGGCTGCGCGGTTAGCAAACGAACTCATGATGAAAGAAAGGGAAACGCTGCAAGTCTTGAAAGAACTCGAAGCCACAAAAACCACTGTTGAAGAGTTAAAACTCAAACTACTGAAAGAATCTGCTACAGTCAACGATCACGTACCAAGAGAGGGAAATGACAAGAATACCCTTGACCCCCAATCAGCTGGTGACAACTTGATGTGCCCTTCTTCATCTCCAGGTTTCATCTTGATGGAATTGAAGCAGGCGAAACTGAACTTAACAAGAACAACAAGTGATCTTGCTGACATCAGATCTACTGTTGAAACGTATAACAAATTGATCGAGAAAGAAAGATTGGAACTTGAGAAAACCCGTCAACGATTATCTTTAAATTGTTCAAAAATTTCGTATTTCGAAGAAGACGTTGACTTTCCGAGGGAGATCCATAGGTTGACTTCTGAAACAGAGGAGTTCAAAAGGGTTGGGGAGGTAGCAAAATCACAAGTTTTAAAAGCAATGGATCAAATCAAACAAACAAAAAGAAATATAAAAACAGCCGAAATTCGTCTTCTTGCTGCTAGAAAGTTGAAGGAAGCTGCTAGAGCTAGTGAAGCGCTTGTGCGATCAGAAATAAAGTCAATGTCAAAAAGTCAAACTTTATCCGAACACGAAGGGGTCACTCTTTCGCTTGACGAATACTCATGTTTAAAACAGAAAGCTCGAGAGGCAGATGAGGCTTTAGTTAGAAAAGTCAACGAATCAGTGGTCAAAGTCAACGAATCCGAGTTGTCAAAATCAGAGATGTTGAATAGGGTAGAGAAAGCAGCAGAAGAAGCGAAGAATAGTAAGACGGTTCTAGAAGAAGCTTTGAGTAAAGTAGAAACCGCTAATAAGGAGAAACTAAAAGCTGAAGAAGCTCTAAGGAAATGGCGATCCGATCATGGTCAAAGAAGAAAGTCAACTGTTCAAAACTTGACCAAGTTCAAGAACTCTTCATGCAGGACCAACAGCACTCGTTTGCTGGACGTAAACGGGGTTCATTTGGGAACTAACACGCCTGGCCCGGTTTTTAGGCCAACGATGTCAATCGGGCAGATTTTGAGCCGGAAGTTGCTTTTGACAGAAGAGTATTCCGGCAAAAGCAATACGAAAAGGAAGGTTTCTTTGGCACAAATGTTGGGTAAACCTACTAGTACTAATGACAGCGGTGGTGATGACGGTGGGAAACGGCGATCAGGAAAGAGAAAGAAGTTCGGGTTCGGTAAGATTTCGTTTCTGGGAGCAAAGCCGAGCAAGAAGAAGAAGAAACATAGCGTAAGTTTGCGACTTTCATGCACCGCCGATTAG 1596 43.55 MWKMGVSDRQIPPKRSPRAFRSDMESLANDSGVRGEVDTSAPFESVKEAVTRFGGVGFWKPHQKQQQQHVHHSENGTEEEFNAAKAEELAARLANELMMKERETLQVLKELEATKTTVEELKLKLLKESATVNDHVPREGNDKNTLDPQSAGDNLMCPSSSPGFILMELKQAKLNLTRTTSDLADIRSTVETYNKLIEKERLELEKTRQRLSLNCSKISYFEEDVDFPREIHRLTSETEEFKRVGEVAKSQVLKAMDQIKQTKRNIKTAEIRLLAARKLKEAARASEALVRSEIKSMSKSQTLSEHEGVTLSLDEYSCLKQKAREADEALVRKVNESVVKVNESELSKSEMLNRVEKAAEEAKNSKTVLEEALSKVETANKEKLKAEEALRKWRSDHGQRRKSTVQNLTKFKNSSCRTNSTRLLDVNGVHLGTNTPGPVFRPTMSIGQILSRKLLLTEEYSGKSNTKRKVSLAQMLGKPTSTNDSGGDDGGKRRSGKRKKFGFGKISFLGAKPSKKKKKHSVSLRLSCTAD 531
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu1g00002 531 Coils Coil 341 396 - -
Hetu1g00002 531 Pfam Weak chloroplast movement under blue light 223 400 IPR008545 -
Hetu1g00002 531 Pfam Weak chloroplast movement under blue light 35 127 IPR008545 -
Hetu1g00002 531 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 35 128 - GO:0005829(PANTHER)|GO:0009903(PANTHER)|GO:0009904(PANTHER)
Hetu1g00002 531 Coils Coil 83 103 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 1 39 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 466 486 - -
Hetu1g00002 531 Coils Coil 108 128 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 134 153 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 512 531 - -
Hetu1g00002 531 Coils Coil 252 279 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 61 80 - -
Hetu1g00002 531 Coils Coil 190 214 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 466 502 - -
Hetu1g00002 531 MobiDBLite consensus disorder prediction 392 412 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu1g00002 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266739 Hetu1g00002 Hetu2g00080
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:190940 Hetu31g02481 Hetu-Chr31:144741146 dispersed
Hetu Hetu-Chr1:190940 Hetu2g00080 Hetu-Chr2:2425445 wgd
Hetu Hetu-Chr1:190940 Hetu2g00001 Hetu-Chr2:102126 wgd
Hetu Hetu-Chr1:190940 Hetu3g00003 Hetu-Chr3:110066 wgd