AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu1g00025 ATGTTAACAACACTTCAATCTCCGGTCACCGGAAACCCCATCCCCTGTCCGAAACCCGGTCGCCGTCCTCTCCAACCGATCACATCCCCAACCAATCTACCCCCAATCGACAACAGCCTTAAAAAACCACATCCAAAGCTCGGGTTCTTCGAGATCTCAGAAGATTCCTCCAACAAGGAGAACCCGACGTATCCAGATTCGATTAAGAATGAAAAACGGCATCAAACTTGTAATCCGGATCAAAATGGGTCTTCGATCTCTATCCCTGCGGTGCAAATCGAGCAGTTTGAGGTGTCTTTGGCGGATGAGCTGACGGCGATCCGTGAAAAGATGGAGCGATTGAAGGCGGATAAAGAGAAGACGGAGAAGATGCTGAGAGAGAGGGAGTTAATGATGGAGATGAAGATGAAAGAGCTCGATCAGCGAGGTGAGATCCAGAAGGTGTTTGAGATCGAAGTCGATCGGCTTTACAGGTTGAACGAGCTCAGATCGTTGTGCAATAGGATATTGCCGATTAGATCGTTGAGAGAGAAGGAACAAGAGAAGATTAAACCGGATAAATCGAAGGTGAGTAGCTAA 579 47.67 MLTTLQSPVTGNPIPCPKPGRRPLQPITSPTNLPPIDNSLKKPHPKLGFFEISEDSSNKENPTYPDSIKNEKRHQTCNPDQNGSSISIPAVQIEQFEVSLADELTAIREKMERLKADKEKTEKMLRERELMMEMKMKELDQRGEIQKVFEIEVDRLYRLNELRSLCNRILPIRSLREKEQEKIKPDKSKVSS 192
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu1g00025 192 MobiDBLite consensus disorder prediction 12 30 - -
Hetu1g00025 192 PANTHER MYELIN TRANSCRIPTION FACTOR 1 186 - -
Hetu1g00025 192 MobiDBLite consensus disorder prediction 1 84 - -
Hetu1g00025 192 Coils Coil 97 131 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu1g00025 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266747 Hetu1g00025 Hetu2g00101
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3295568 Hetu Hetu10g03793 Hetu-Chr10:220977504 Hetu1g00025 Hetu-Chr1:1328361
3299660 Hetu Hetu11g03927 Hetu-Chr11:221631269 Hetu1g00025 Hetu-Chr1:1328361
3303072 Hetu Hetu12g03643 Hetu-Chr12:209795430 Hetu1g00025 Hetu-Chr1:1328361
3483155 Hetu Hetu2g02355 Hetu-Chr2:145707051 Hetu1g00025 Hetu-Chr1:1328361
3528675 Hetu Hetu1g00025 Hetu-Chr1:1328361 Hetu2g00101 Hetu-Chr2:3425198
3529077 Hetu Hetu1g00025 Hetu-Chr1:1328361 Hetu2g00028 Hetu-Chr2:953783
3530479 Hetu Hetu1g00025 Hetu-Chr1:1328361 Hetu3g00023 Hetu-Chr3:1146743