AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu1g00058 | ATGGACATCGAAAAGAAAGACGAACAGCCCCTCAGATCACCCGTACCCACCTCTGCACCATCTGACCCGACCCGCAAGCTCAAACGCCGCAGATGCATCATCATCTGCTCATCCATAACCGCTGTCATCCTCACCATCGCTCTAGTCCTCTTAATATTAGGCCTAACCGTTTTCAAAGCCAAAAAACCGGTTATAACCGTTAACTCCGTTTCCCTCGAAGACCTCGACGTCTCGGTTAACCCGATACCGATCCGGGTTTCATTAAACCTGTCACTGGCACTCGGTATAGCAATCAAAAACCCGAACAAGGTGAGTATTAAGTACCGGAGCAGCTCTGCGACTCTCCGGTATAGAAATAAAGATGTGGGGGATGTTCCTATACCCGCTGGACGGCTTGGATCCGACGATACGGAGAATTTGAATTTGACTCTAACGGTTTTTGCTGATCGGATGGTTTCGGATTCGGAGATTTATCGTGATGTTTTAAGAGGTAGTTTGCCGTTTTCGACTTATACTAGGATAAAGGCGAAGGTCCGCGTGCTTTTTGTTCATATTCGGGTTACCTCTACCTCTACTTGTGATTTTGATATTGATATACAGAATAGGAGTGTTGGGAATCAGACTTGTCATTACAAGAACAAGTTTTAG | 648 | 45.99 | MDIEKKDEQPLRSPVPTSAPSDPTRKLKRRRCIIICSSITAVILTIALVLLILGLTVFKAKKPVITVNSVSLEDLDVSVNPIPIRVSLNLSLALGIAIKNPNKVSIKYRSSSATLRYRNKDVGDVPIPAGRLGSDDTENLNLTLTVFADRMVSDSEIYRDVLRGSLPFSTYTRIKAKVRVLFVHIRVTSTSTCDFDIDIQNRSVGNQTCHYKNKF | 215 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu1g00058 | 215 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 16 | 200 | - | - | |
| Hetu1g00058 | 215 | SUPERFAMILY | LEA14-like | 43 | 153 | - | - | |
| Hetu1g00058 | 215 | Pfam | Late embryogenesis abundant protein | 96 | 187 | IPR004864 | - | |
| Hetu1g00058 | 215 | Gene3D | - | 51 | 200 | - | - | |
| Hetu1g00058 | 215 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu1g00058 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 107441 | Hetu1g00058 | Hetu28g00711 | |
| 107442 | Hetu1g00058 | Hetu29g00873 | |
| 107443 | Hetu1g00058 | Hetu30g00759 | |
| 266756 | Hetu1g00058 | Hetu2g00121 | |
| 411755 | Hetu1g00058 | Hetu31g02166 | |
| 411756 | Hetu1g00058 | Hetu32g02171 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3322989 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu33g02099 | Hetu-Chr33:118173971 | |
| 3528688 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu2g00121 | Hetu-Chr2:3871386 | |
| 3529090 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu2g00042 | Hetu-Chr2:1451491 | |
| 3529984 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu28g00711 | Hetu-Chr28:38683308 | |
| 3530022 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu29g00873 | Hetu-Chr29:48678879 | |
| 3530491 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu3g00059 | Hetu-Chr3:2861853 | |
| 3531683 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu30g00759 | Hetu-Chr30:41094592 | |
| 3531801 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu31g02165 | Hetu-Chr31:123633890 | |
| 3532053 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu32g02170 | Hetu-Chr32:125743373 | |
| 3532379 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu33g02098 | Hetu-Chr33:118133313 | |
| 3532974 | Hetu | Hetu1g00058 | Hetu-Chr1:2834792 | Hetu46g01616 | Hetu-Chr46:90705161 |