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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu1g00093 ATGGATGGAACCTATAACAGGCCAAGCAATTTCAGCTACCAAACAGACCGGAGGCTGGAGATTGTGAGCGGCAAAGGGAACCAAATCTACGCCGCCGGGGGCGGTGGGAGGTCGCCGGAGTATGCGCCGAGGGTGTCGACGTCTTCGGCGAAGCCGTGGGGCGGGTTTAGTGATCCGGAGAGTAAACGAAAGAAGAGGATTGCTAAGTATAAAGTGTACACGATTGAAGGACGAGTGAAGGCTTCGTTTAGGAATGGGATTCGTTGGATTAAGGCCAAGTGTTCTGATTTTATTCATGGGTTGTGA 306 51.96 MDGTYNRPSNFSYQTDRRLEIVSGKGNQIYAAGGGGRSPEYAPRVSTSSAKPWGGFSDPESKRKKRIAKYKVYTIEGRVKASFRNGIRWIKAKCSDFIHGL 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu1g00093 101 MobiDBLite consensus disorder prediction 33 60 - -
Hetu1g00093 101 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 40 100 - -
Hetu1g00093 101 Pfam Domain of unknown function (DUF3511) 56 100 IPR021899 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu1g00093 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266771 Hetu1g00093 Hetu2g00152
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3323019 Hetu Hetu1g00093 Hetu-Chr1:3747737 Hetu7g02808 Hetu-Chr7:148567583
3528711 Hetu Hetu1g00093 Hetu-Chr1:3747737 Hetu2g00152 Hetu-Chr2:4681001
3529110 Hetu Hetu1g00093 Hetu-Chr1:3747737 Hetu2g00069 Hetu-Chr2:2211084
3530512 Hetu Hetu1g00093 Hetu-Chr1:3747737 Hetu3g00086 Hetu-Chr3:3655441