Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu1g00104 | ATGAAGAATAATAAATCAAACTCCATTTTGTCACTTGGTTTTCTTTTGTTTATGCTTATTTTCTCTCATCCATCATCAACTCATGCTCAAGAAGTTGAGGATCAAAGCGGATTTGATTATTTGAGAGGTAGCACGATGGGGCCGGATAGATGGGGTGTGATGAGGAATGATTGGTCATTGTGCAGCAATGGGACGATGCAGTCTCCCATTGATATGTCGAGTCGAAGGGTGGAGATGGTGGACCACCCTAAGAATTTATACAGAAACTATAAGCCTTGTAATGCAACCATGCTTAACAGAGGTCATGACATTATGGTTAAATGGATAGGAGATGCAGGATCAATTATCATCAATGACACTGAGTATGCTTTAAAACAAGCACATTGGCACTCACCTTCGGAGCATACCATAAATGGCATAAGATTTGACATGGAACTACATATGGTCCACCTCAGTATCGACAACAAAATAGCTGTCATTGCTGTACTTTATAGAATCGGCAGACCTAGCCATTTTCTTTCTAGGTTGGCTGTAAACATATCATCTATGATAGATCGAAAGGGCATGCGTGGACACAGTGGGATAGTAAATCCTAGAGAGATTCAAATGAGCAGTAGGATGTATTACCGATATATCGGTTCACTAACGGTCCCTCCTTGCACCGAGAAAGTTGTTTGGACCATTAGCAGAAGGATAAGAACAGTTTCAATACGTCAAGTTAAATTACTTCGGGAGGCTGTAAATGATTATGCAGAATATAATGCAAGACCAGTACAACCAGACAATCTACGAGACATTCTTCTTTATGCCCAGGCTCGAGAGAGGAAATAG | 831 | 40.67 | MKNNKSNSILSLGFLLFMLIFSHPSSTHAQEVEDQSGFDYLRGSTMGPDRWGVMRNDWSLCSNGTMQSPIDMSSRRVEMVDHPKNLYRNYKPCNATMLNRGHDIMVKWIGDAGSIIINDTEYALKQAHWHSPSEHTINGIRFDMELHMVHLSIDNKIAVIAVLYRIGRPSHFLSRLAVNISSMIDRKGMRGHSGIVNPREIQMSSRMYYRYIGSLTVPPCTEKVVWTISRRIRTVSIRQVKLLREAVNDYAEYNARPVQPDNLRDILLYAQARERK | 276 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu1g00104 | 276 | SMART | Carb-anhydrase-2a | 40 | 270 | IPR001148 | - | |
| Hetu1g00104 | 276 | Pfam | Eukaryotic-type carbonic anhydrase | 47 | 267 | IPR001148 | - | |
| Hetu1g00104 | 276 | ProSiteProfiles | Alpha-carbonic anhydrases profile. | 36 | 270 | IPR001148 | - | |
| Hetu1g00104 | 276 | SUPERFAMILY | Carbonic anhydrase | 38 | 266 | IPR036398 | - | |
| Hetu1g00104 | 276 | CDD | alpha-CA-prokaryotic-like | 47 | 268 | IPR041891 | - | |
| Hetu1g00104 | 276 | ProSitePatterns | Alpha-carbonic anhydrases signature. | 133 | 149 | IPR018338 | GO:0004089(InterPro)|GO:0008270(InterPro) | |
| Hetu1g00104 | 276 | Gene3D | Alpha carbonic anhydrase | 35 | 276 | IPR036398 | - | |
| Hetu1g00104 | 276 | PANTHER | CARBONIC ANHYDRASE | 22 | 262 | IPR023561 | GO:0004089(InterPro)|GO:0006730(PANTHER)|GO:0008270(InterPro)|GO:0016836(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu1g00104 | K01674 | carbonic anhydrase [EC:4.2.1.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3323029 | Hetu | Hetu1g00104 | Hetu-Chr1:3999778 | Hetu31g03433 | Hetu-Chr31:194354211 | |
| 3528721 | Hetu | Hetu1g00104 | Hetu-Chr1:3999778 | Hetu2g00165 | Hetu-Chr2:4850422 | |
| 3530521 | Hetu | Hetu1g00104 | Hetu-Chr1:3999778 | Hetu3g00098 | Hetu-Chr3:3862545 |