Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu1g00390 | ATGGCATCCATCTCCGCTCCCATTTCTACCTCTTCACCATCCTTCCCTCGGCTCCAAAAGCCTACGATCACCACCATCGGTTCTCCATTTCTCCGATTGCCATCGATAAGCAAGGCAGGGAAAGTTAGATGTTCCATCGAAGATAAGCCTCTTGTCAAACCCATCGATGATGCACCACCAACTCCTGAAGATGACTTGACTCCACTAGCACCCTGTCCAGATGAGGTGACTCCACCATCACCCTGTCCAGGAAAGAACTCATGGCCGGAGCTTGTAGGGAAACCTGGAGTAGTGGCAGCATCTATAATTGAGAAAGAGAATCCACTGGTTAATGCTATCGTGCTATTGGAAGGAACTTTCATCACTATGGATTTTCGGTGCGACCGTGTACGGGTGTGGGTGAACACTGACGGGGTGGTGATTGAAACACCTGTCATCACATGA | 444 | 49.55 | MASISAPISTSSPSFPRLQKPTITTIGSPFLRLPSISKAGKVRCSIEDKPLVKPIDDAPPTPEDDLTPLAPCPDEVTPPSPCPGKNSWPELVGKPGVVAASIIEKENPLVNAIVLLEGTFITMDFRCDRVRVWVNTDGVVIETPVIT | 147 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu1g00390 | 147 | Gene3D | Trypsin Inhibitor V, subunit A | 79 | 147 | - | - | |
| Hetu1g00390 | 147 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Hetu1g00390 | 147 | PRINTS | Potato inhibitor I signature | 124 | 134 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hetu1g00390 | 147 | PRINTS | Potato inhibitor I signature | 112 | 123 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hetu1g00390 | 147 | PRINTS | Potato inhibitor I signature | 87 | 100 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hetu1g00390 | 147 | MobiDBLite | consensus disorder prediction | 51 | 87 | - | - | |
| Hetu1g00390 | 147 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 82 | 146 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hetu1g00390 | 147 | MobiDBLite | consensus disorder prediction | 64 | 85 | - | - | |
| Hetu1g00390 | 147 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 81 | 146 | IPR036354 | - | |
| Hetu1g00390 | 147 | Pfam | Potato inhibitor I family | 85 | 146 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hetu1g00390 | 147 | ProSitePatterns | Potato inhibitor I family signature. | 88 | 99 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu1g00390 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr1:19001383 | Hetu2g00333 | Hetu-Chr2:13517624 | dispersed | |
| Hetu | Hetu-Chr1:19001383 | Hetu1g00391 | Hetu-Chr1:19152017 | tandem |