AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu1g01726 ATGCAGAGATCCACAATGCTTCTATGTGCTTTCATCGTCCCATGTTTTGTTTGTGACGTTATTTACAACATATGGTGGTTCACCTCAGGAGGGGCCCACATACCCTACATTTACAACCTGTACCTTAGTCATGCCATAGCATGCTTGATACACCTGACTTGTTGGTTATACCGGACATCACTATTCTTGCTTGTTTGTGTTCTTTTCAAACTCACATGTTCTCTACAAATACTTAGGCTGGAAGATTTTGCTCACGTGTTTGAAAAGTTATCTGATGTGGGCCCAATATTGGTCCAACACCTCACCATCAAAAGAAACCTTCGCGTTATAAGCCATAGGTTTCGTGCGTTTATCTTATTGACATTAATACTGGTGACAACAAGCCAGTTCGCTTCTCTGCTTGTTACAACTGTGGACGGCGCAGTTGTAAATGTATCTACCACTGGAGAACTCGCGTTATGCTCTGTTACGCTTGTGTTTGGTCTGTATATATGCCAACGCAGTGCAGCAAAGATCACACACAAAGCTCAGTCCTTGACAAGCTTGGCCACTAAATGGCATATGTGTGCTACCACCCACAATTTTGTTGATATGGGCAACAATGATGAAAACCCAAGGGATAATATTACTCCACGAATGGCCGATCTGGATTCAGAAAATGAGGTTGGAGATGGTGATGATGAACTAGACAACACAAACTTCATTCCGGTTTATAAGAACACAATTTCATACCAGCAAAGACAAGCTTTAGTGACATATTTTGAGAACAATGAAACTGGAATCACGGTGTATGGGTTCATGTTAGACAGGTCATCTATAAACACGGTCTTTGCAATTCAATTGTCACTTGCGCTATGGTTGTTCGATAAGACAATTGGCTTCGGTTGA 888 41.67 MQRSTMLLCAFIVPCFVCDVIYNIWWFTSGGAHIPYIYNLYLSHAIACLIHLTCWLYRTSLFLLVCVLFKLTCSLQILRLEDFAHVFEKLSDVGPILVQHLTIKRNLRVISHRFRAFILLTLILVTTSQFASLLVTTVDGAVVNVSTTGELALCSVTLVFGLYICQRSAAKITHKAQSLTSLATKWHMCATTHNFVDMGNNDENPRDNITPRMADLDSENEVGDGDDELDNTNFIPVYKNTISYQQRQALVTYFENNETGITVYGFMLDRSSINTVFAIQLSLALWLFDKTIGFG 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu1g01726 295 Pfam Protein of unknown function (DUF3537) 1 279 IPR021924 -
Hetu1g01726 295 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 2 293 IPR021924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu1g01726 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:96408223 Hetu3g01392 Hetu-Chr3:75913223 dispersed
Hetu Hetu-Chr1:96408223 Hetu2g01508 Hetu-Chr2:86039794 wgd
Hetu Hetu-Chr1:96408223 Hetu3g01571 Hetu-Chr3:90003515 wgd