AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu22g00459 ATGCACCCTTGTATTATATTATATAAATCTCTTAAACTTTGTCTTCACAGAAACAACCAACCTGGGATCTTTGAGGATCTGCAATTGCATAAACAAGACCCCATTAATGGTGGCTCATTAATTACTTCTTCTCTTGTGGTGGTGGCAGACGGTGGCGGTGGCCGGTGGGTGGAGGTGGTGGTTAATTTTAGAGTAAAGTCCTATTTGAGTCCCTGTGTTTCTCTAACGAATCTGAACTGCTTAGATTCATCCAACTATCCAAGATTCTTAAAGATTCTGTTTTTGTTTTGGGGTTGCTTCAAATATAGTTTCTTGAAGATGTATGTGGTGGATAGCAGAGGAGGAGCAATAGCATGCATGATGCTTGCATTACTCTTCTTAGGAACATGGCCCGCCATTTTAACGTTGTTGGAACGACGTGGTCGGCTTCCTCAACACACTTATCTTGATTACACAATCACCAATCTTTTGGCTGCTGTCATAATCGCTTTCACATTTGGGGAATTGGGCCATAAGAATGACGATAAGCCCAATTTTCTAGTCCAGCTTTCTCAGTTGAAGAATAATTGGCCGAGCATTCTGTTCGCAATGGCGGGTGGGGTTGTTTTAAGTCTGGGAAATCTGTCAACGCAATATGCATGGGCATTTGTCGGTTTATCTGTAACCGAGGTGATCACCTCAAGTATTACTGTTGTCATAGGTACGACTTTGAACTACTTTTTAGACGACAAGATCAACAGAGCCGAGATACTGTTCCCTGGCGTCGCGTGTTTCTTGATTGCGGTTTGTTTTGGCTCTTTTGTGCATGCATCTAACGCCAAAGATAATAAAACAAAGCTTGAAAGATTAGGCGCGGGTGAAAAAGGAGTTATTAGTAACGGATCAAACCCGATTCCAAAAAAAGATTTGGAGAATGGAAGTGTTCAAGTCGAGAAAGCGAAAGTAGGGACCGCAAGTTTTCTAATTGAACTCGAAAGCCGAAGATCAATCAAGGTGTTTGGGAAAAGCACTTTGATTGGTTTGTCCATGTGTTTCTTTGCGGGAGTCTGTTTCTCACTTTTCTCACCGGCTTTTAATCTCGCAACCAATGACCAATGGAATACATTGGATGATGGTGTCCCTCTCTTAAGCGTCTACATAGCTTTTTTCTACTTCTCGTGCTCGTGTTTTGTGATTGCCATAATCTTGAACATTACATTCCTTTATCGCCCTGCGTTCAACTTGCCTCGATCTTCAATCAAGGCGTATCTAAACGACTGGGACGGTAGAGGCTGGGCGTTTCTGGCTGGATTTTTGTGTGGTTTTGGGAACGGTCTTCAGTTTATGGGAGGTCAAGCTGCTGGTTATGCTGCAGCTGATGCAGTTCAGGCACTTCCACTTGTAAGTACCTTTTGGGGGGTGCTCTTTTTTGGTGAGTATCGCAAATCGTCGAGAAGAACATACGTGCTTCTCGTAGGCATGCTTTCCATGTTTATTGTGGCTGTTGGGGTTCTAATGGCGTCATCTGGACACCGAAAACATTAA 1524 43.18 MHPCIILYKSLKLCLHRNNQPGIFEDLQLHKQDPINGGSLITSSLVVVADGGGGRWVEVVVNFRVKSYLSPCVSLTNLNCLDSSNYPRFLKILFLFWGCFKYSFLKMYVVDSRGGAIACMMLALLFLGTWPAILTLLERRGRLPQHTYLDYTITNLLAAVIIAFTFGELGHKNDDKPNFLVQLSQLKNNWPSILFAMAGGVVLSLGNLSTQYAWAFVGLSVTEVITSSITVVIGTTLNYFLDDKINRAEILFPGVACFLIAVCFGSFVHASNAKDNKTKLERLGAGEKGVISNGSNPIPKKDLENGSVQVEKAKVGTASFLIELESRRSIKVFGKSTLIGLSMCFFAGVCFSLFSPAFNLATNDQWNTLDDGVPLLSVYIAFFYFSCSCFVIAIILNITFLYRPAFNLPRSSIKAYLNDWDGRGWAFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVLFFGEYRKSSRRTYVLLVGMLSMFIVAVGVLMASSGHRKH 507
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu22g00459 507 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 107 506 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
Hetu22g00459 507 Pfam Ureide permease 147 501 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu22g00459 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
288314 Hetu22g00459 Hetu24g00532
289341 Hetu22g00459 Hetu23g00534
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr22:19915100 Hetu23g00534 Hetu-Chr23:26987069 dispersed
Hetu Hetu-Chr22:19915100 Hetu22g00461 Hetu-Chr22:19928913 proximal
Hetu Hetu-Chr22:19915100 Hetu23g00532 Hetu-Chr23:26942374 wgd
Hetu Hetu-Chr22:19915100 Hetu24g00531 Hetu-Chr24:23897806 wgd