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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu23g00506 ATGCCGACTTTAACGAAGCTATACTCGATGCAAGAAGCTTCAGAGCACAATTCCGCCGGTGATTGCTGGATTGTTGTTGACGGCAAGGTCTATGATGTGTCATCATATCTAGAAGAACATCCAGGTGGTGATGATGTCATCCTACAGGTTACAGGTAAGGTTACCCTTCTAGGTGTCGTAATGACTTTATATTTTGAAGGGAAAGATGCGACGGATGAGTTTGAAGACGCGGGCCACAGCAAGAGTGCCAGGGAACTTATGGAGACTTTCTGTGTTGGTGAGCTGGACCCGTCGGACATCCCTCAACTTGAAGTTGTCTCGGAGAAACAAAAAAGTTACATCCCTGAGAAGCTGGTTGACCTAAGCAAGCAATACTGGGCGGCTCCAGTGGCAGTTGTCGGCATATCGGTTGTTGTCACCTTCTTGTACTTACGCAACAAGTAG 444 47.3 MPTLTKLYSMQEASEHNSAGDCWIVVDGKVYDVSSYLEEHPGGDDVILQVTGKVTLLGVVMTLYFEGKDATDEFEDAGHSKSARELMETFCVGELDPSDIPQLEVVSEKQKSYIPEKLVDLSKQYWAAPVAVVGISVVVTFLYLRNK 147
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu23g00506 147 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Hetu23g00506 147 PANTHER CYTOCHROME B5 4 142 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Hetu23g00506 147 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 96 IPR001199 -
Hetu23g00506 147 SMART Cyt-b5-2 8 96 IPR001199 -
Hetu23g00506 147 Pfam Cytochrome b5-like Heme-Steroid binding domain 10 53 IPR001199 -
Hetu23g00506 147 Pfam Cytochrome b5-like Heme-Steroid binding domain 65 96 IPR001199 -
Hetu23g00506 147 SUPERFAMILY Cytochrome b5-like heme-steroid binding domain 4 53 IPR036400 -
Hetu23g00506 147 SUPERFAMILY Cytochrome b5-like heme-steroid binding domain 63 104 IPR036400 -
Hetu23g00506 147 Gene3D - 3 101 IPR036400 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu23g00506 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
289335 Hetu22g00473 Hetu23g00506
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3334301 Hetu Hetu23g00506 Hetu-Chr23:25789101 Hetu23g01932 Hetu-Chr23:99574329
3588104 Hetu Hetu22g00473 Hetu-Chr22:20510158 Hetu23g00506 Hetu-Chr23:25789101
3593209 Hetu Hetu23g00506 Hetu-Chr23:25789101 Hetu24g00559 Hetu-Chr24:24790004
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hetu1g01337 HSH 31 281 NADPH P450 reductases gene family AT5G17770 72.093 5.73e-137 388.0
Hetu1g02085 HSH 3 42 NADPH P450 reductases gene family AT5G53560 40.0 2.10e-06 43.1
Hetu2g01141 HSH 31 281 NADPH P450 reductases gene family AT5G17770 72.093 7.21e-137 387.0
Hetu2g01799 HSH 3 46 NADPH P450 reductases gene family AT5G53560 38.636 1.44e-07 46.2
Hetu3g01195 HSH 31 281 NADPH P450 reductases gene family AT5G17770 72.093 1.36e-136 387.0
Hetu3g01946 HSH 3 42 NADPH P450 reductases gene family AT5G53560 40.0 3.10e-06 43.1
Hetu7g00002 . 1 137 NADPH P450 reductases gene family AT5G48810 53.285 1.81e-49 153.0
Hetu8g00089 . 1 132 NADPH P450 reductases gene family AT5G48810 54.545 5.89e-48 150.0
Hetu9g00326 . 1 137 NADPH P450 reductases gene family AT5G48810 52.555 3.81e-48 150.0
Hetu10g00336 HSH,WGDA 41 281 NADPH P450 reductases gene family AT5G17770 84.647 1.17e-157 439.0
Hetu10g01833 . 5 133 NADPH P450 reductases gene family AT2G32720 72.093 2.44e-71 208.0
Hetu10g02037 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 55.118 1.18e-45 145.0
Hetu10g02038 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 51.181 5.89e-40 128.0
Hetu10g02039 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 41.406 1.64e-30 103.0
Hetu10g02040 . 1 128 NADPH P450 reductases gene family AT5G53560 57.463 4.73e-54 164.0
Hetu10g02041 . 1 124 NADPH P450 reductases gene family AT5G53560 43.137 1.68e-40 131.0
Hetu11g00392 . 30 222 NADPH P450 reductases gene family AT5G17770 75.862 4.36e-108 318.0
Hetu11g00894 . 1 133 NADPH P450 reductases gene family AT5G53560 54.815 1.30e-49 154.0
Hetu11g01836 . 5 133 NADPH P450 reductases gene family AT2G32720 72.093 4.47e-71 207.0
Hetu11g02099 HSH 1 130 NADPH P450 reductases gene family AT5G53560 54.615 1.13e-46 146.0
Hetu11g02102 HSH 1 127 NADPH P450 reductases gene family AT5G53560 41.406 1.64e-30 103.0
Hetu11g02103 . 29 128 NADPH P450 reductases gene family AT5G53560 55.14 3.93e-38 124.0
Hetu11g02105 . 27 124 NADPH P450 reductases gene family AT2G32720 44.094 1.25e-27 97.8
Hetu12g00321 HSH,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 82.143 2.61e-160 448.0
Hetu12g00801 . 1 133 NADPH P450 reductases gene family AT5G53560 54.074 2.34e-49 153.0
Hetu12g01867 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 55.118 4.33e-46 146.0
Hetu12g01868 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 51.181 5.89e-40 128.0
Hetu12g01869 ACH,HSH 1 127 NADPH P450 reductases gene family AT5G53560 41.406 1.64e-30 103.0
Hetu12g01870 . 1 128 NADPH P450 reductases gene family AT5G53560 57.463 4.73e-54 164.0
Hetu12g01871 . 1 124 NADPH P450 reductases gene family AT5G53560 43.137 1.68e-40 131.0
Hetu16g00701 HSH 1 132 NADPH P450 reductases gene family AT5G53560 48.872 5.83e-44 140.0
Hetu16g01343 HSH,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 82.143 1.93e-160 445.0
Hetu16g03215 . 38 273 NADPH P450 reductases gene family AT5G17770 36.923 9.00e-47 167.0
Hetu16g03217 . 38 273 NADPH P450 reductases gene family AT5G17770 36.923 8.65e-47 167.0
Hetu17g00590 HSH 1 132 NADPH P450 reductases gene family AT5G53560 49.624 8.70e-46 143.0
Hetu17g01004 HSH,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 81.746 1.75e-158 443.0
Hetu17g01234 . 5 133 NADPH P450 reductases gene family AT2G32720 72.868 4.97e-72 209.0
Hetu17g03136 . 38 273 NADPH P450 reductases gene family AT5G17770 37.308 1.71e-46 166.0
Hetu18g00780 . 1 132 NADPH P450 reductases gene family AT5G53560 51.128 9.25e-46 145.0
Hetu18g01339 . 5 133 NADPH P450 reductases gene family AT2G32720 73.643 3.82e-72 210.0
Hetu18g01463 HSH,WGDA 30 281 NADPH P450 reductases gene family AT5G17770 82.143 2.29e-160 446.0
Hetu18g03362 . 38 273 NADPH P450 reductases gene family AT5G17770 36.923 4.69e-47 167.0
Hetu19g00409 . 31 281 NADPH P450 reductases gene family AT5G17770 78.486 1.15e-147 413.0
Hetu20g00505 . 31 281 NADPH P450 reductases gene family AT5G17770 79.283 4.55e-147 416.0
Hetu21g00411 . 31 281 NADPH P450 reductases gene family AT5G17770 79.283 1.19e-149 418.0
Hetu22g00473 HSH 1 134 NADPH P450 reductases gene family AT1G26340 61.194 3.42e-59 177.0
Hetu22g01843 . 1 133 NADPH P450 reductases gene family AT5G53560 74.436 4.08e-72 214.0
Hetu23g00506 HSH 1 134 NADPH P450 reductases gene family AT1G26340 55.705 1.25e-55 169.0
Hetu23g01932 . 1 133 NADPH P450 reductases gene family AT5G53560 75.188 5.46e-73 214.0
Hetu24g00559 HSH 1 134 NADPH P450 reductases gene family AT1G26340 61.194 3.42e-59 177.0
Hetu24g02005 . 1 133 NADPH P450 reductases gene family AT5G53560 74.436 1.26e-72 213.0
Hetu25g01722 . 38 273 NADPH P450 reductases gene family AT5G17770 38.76 4.20e-50 176.0
Hetu26g01871 . 38 273 NADPH P450 reductases gene family AT5G17770 38.76 6.26e-50 176.0
Hetu27g01925 . 38 273 NADPH P450 reductases gene family AT5G17770 39.147 1.85e-50 177.0
Hetu37g00057 . 6 130 NADPH P450 reductases gene family AT2G32720 45.926 5.06e-40 129.0
Hetu37g03877 . 5 125 NADPH P450 reductases gene family AT5G53560 59.35 4.85e-48 150.0
Hetu38g03605 HSH 29 126 NADPH P450 reductases gene family AT5G53560 62.376 7.09e-36 117.0
Hetu39g03250 HSH 48 126 NADPH P450 reductases gene family AT5G53560 53.086 1.00e-22 83.2
Hetu39g03269 . 5 125 NADPH P450 reductases gene family AT5G53560 59.35 4.85e-48 150.0
Hetu44g01064 . 46 133 NADPH P450 reductases gene family AT2G32720 60.0 4.12e-33 113.0
Hetu45g01542 . 40 87 NADPH P450 reductases gene family AT5G17770 74.0 3.84e-18 77.4
Hetu46g00096 . 18 123 NADPH P450 reductases gene family AT5G48810 55.66 2.36e-37 124.0
Hetu46g01282 HSH 2 120 NADPH P450 reductases gene family AT1G60660 63.866 2.12e-50 154.0
Hetu46g03865 HSH 6 83 NADPH P450 reductases gene family AT1G26340 38.462 3.22e-14 65.5
Hetu46g03964 HSH 39 281 NADPH P450 reductases gene family AT5G17770 39.051 5.54e-62 197.0
Hetu47g01227 HSH 2 120 NADPH P450 reductases gene family AT1G60660 64.706 3.39e-49 155.0
Hetu47g04015 HSH 6 83 NADPH P450 reductases gene family AT1G26340 38.462 3.65e-14 65.1
Hetu47g04100 HSH 39 281 NADPH P450 reductases gene family AT5G17770 40.625 2.33e-62 198.0
Hetu47g04105 . 88 253 NADPH P450 reductases gene family AT5G17770 48.81 8.07e-54 171.0
Hetu48g01121 HSH 2 120 NADPH P450 reductases gene family AT1G60660 63.866 2.12e-50 154.0
Hetu48g03579 HSH 6 83 NADPH P450 reductases gene family AT1G26340 38.462 2.97e-14 65.5
Hetu48g03681 HSH 39 281 NADPH P450 reductases gene family AT5G17770 40.625 1.01e-61 199.0