AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu24g00547 | ATGTATCAACTTGTTCAGAGTCAACAGTCTGTGTCTATACATGTAATAAAGCTTATATTTTCTTTATATAAATTCATACTCATCTTCTACTTTAATCAATTTCTTCATCATTTTCTGCCACGCATCCACCTTTCTTTCTTATTTGGTTTAAGGAAGATGGCTCATATGGGATCAAGCAAAAACAGAGGGGAGGTGAGGATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTACATAGCCGAATTATCCGAGGCATCGGTTAAAGAACGCGGGTTTTTCGCCATTGCGTTGTCGGGTGGCTCCATCATTAGCTTGATGAGGAATCTGTGTGGAGCTCCTTATAACAAGACTGTTGACTGGTCAAAATGGTATATATTTTGGGCAGATGAAAGAGTGGTTGCCAAGAATCATGTTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCCAAGTTACCTATTGTACCTAGTCATGTACATTCCATCAATGATTCTCTAACTGCAGAAGAAGCTGCAAACGAATACGAGTTTGTGATCAGGCAACTAGTCAGGACCCGTGTGGTCAACGTATCCGAGGTCAGCGACTGCCCGAAGTTTGACTTAATTCTTCTAGGGATGGGTCCGGATGGGCACGTGGCATCTTTGTTTCCGAATCATTCGGCTCTTGAAGAAAAGAACGAATGGGTGACATTTATCACAACGTCCCCTAAGCCTCCGCCTGAAAGAATCACCTTCACACTGCCTGTTATCAACTCTGCCGCCAATGTGGCAGTGGTGGTGACAGGTGGCGGGAAAGCGGAGGCTTCCCAGCTGGCGATAGGTGATGTGGGACCCGAGTGTCCGGTTTTGCCAGCTAGGATGATTGAACCAACTGTAGGGAAACTTGTGTGGTTTTTGGATAACCAGGCTGCTTCAAAGCTCTAG | 936 | 44.23 | MYQLVQSQQSVSIHVIKLIFSLYKFILIFYFNQFLHHFLPRIHLSFLFGLRKMAHMGSSKNRGEVRIHESLDELSTDLADYIAELSEASVKERGFFAIALSGGSIISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSEVSDCPKFDLILLGMGPDGHVASLFPNHSALEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKAEASQLAIGDVGPECPVLPARMIEPTVGKLVWFLDNQAASKL | 311 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu24g00547 | 311 | CDD | 6PGL | 72 | 303 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Hetu24g00547 | 311 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 71 | 301 | IPR006148 | GO:0005975(InterPro) | |
| Hetu24g00547 | 311 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 65 | 311 | IPR037171 | - | |
| Hetu24g00547 | 311 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 51 | 311 | IPR039104 | - | |
| Hetu24g00547 | 311 | Gene3D | - | 60 | 311 | - | - | |
| Hetu24g00547 | 311 | FunFam | Probable 6-phosphogluconolactonase | 60 | 311 | - | - | |
| Hetu24g00547 | 311 | Coils | Coil | 71 | 91 | - | - | |
| Hetu24g00547 | 311 | NCBIfam | 6-phosphogluconolactonase | 67 | 311 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu24g00547 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3337414 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu49g03807 | Hetu-Chr49:219999060 | |
| 3589177 | Hetu | Hetu22g00471 | Hetu-Chr22:20321798 | Hetu24g00547 | Hetu-Chr24:24336849 | |
| 3593211 | Hetu | Hetu23g00511 | Hetu-Chr23:26507249 | Hetu24g00547 | Hetu-Chr24:24336849 | |
| 3596113 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu46g03336 | Hetu-Chr46:197888324 | |
| 3596354 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu47g03391 | Hetu-Chr47:212712671 | |
| 3596588 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu48g03172 | Hetu-Chr48:187995199 | |
| 3596619 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu48g03015 | Hetu-Chr48:181146343 | |
| 3596934 | Hetu | Hetu24g00547 | Hetu-Chr24:24336849 | Hetu50g03503 | Hetu-Chr50:205386105 |