Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu2g00031 | ATGAAGGTGCTATATTTAGAAGTGTTAAAGGTTGCACGGGATCAAAACAAGTCGTTAACGTTGAAAATCGAGAAGTTGTTGCAACAAAGGGGCGAGCATCTGACTTCAATCGTCACCGGAAACTTCAAATTTCAGGGTAAGCGTACTGCGGTTACTTTTTCAGAGATTGAAATGGGGCATTGCTTCTCTTCGCCTCGGGCTGATGAAGACGAGACCAACAGTCATGCTCAGCTTGCGGGAGGTAACGTGACTCTCATCACTGCCAAGAACGCTTGGGATCAAAAACTGGCAGAAGCAAAGACTCAAGGCAAAATAGTGATTGGCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATGGCACCTTACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTTCTGACCGTAGACGTTGACGAATTAACGGATTTTAGCACACAACTGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAAATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCCATTGTTGATTCACAAGCAACCATAAATCCGTAA | 591 | 42.98 | MKVLYLEVLKVARDQNKSLTLKIEKLLQQRGEHLTSIVTGNFKFQGKRTAVTFSEIEMGHCFSSPRADEDETNSHAQLAGGNVTLITAKNAWDQKLAEAKTQGKIVIGNFSATWCGPCKSMAPYYIELSEKYPSLMFLTVDVDELTDFSTQLDVKATPTFFFFKDGQQIDKLVGANKPELQKKITAIVDSQATINP | 196 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu2g00031 | 196 | PRINTS | Thioredoxin family signature | 153 | 164 | - | - | |
| Hetu2g00031 | 196 | PRINTS | Thioredoxin family signature | 114 | 123 | - | - | |
| Hetu2g00031 | 196 | PRINTS | Thioredoxin family signature | 106 | 114 | - | - | |
| Hetu2g00031 | 196 | Pfam | Thioredoxin | 85 | 185 | IPR013766 | - | |
| Hetu2g00031 | 196 | Gene3D | Glutaredoxin | 58 | 195 | - | - | |
| Hetu2g00031 | 196 | CDD | TRX-family | 96 | 184 | - | - | |
| Hetu2g00031 | 196 | Coils | Coil | 9 | 29 | - | - | |
| Hetu2g00031 | 196 | PANTHER | THIOREDOXIN | 81 | 186 | IPR050620 | - | |
| Hetu2g00031 | 196 | SUPERFAMILY | Thioredoxin-like | 77 | 189 | IPR036249 | - | |
| Hetu2g00031 | 196 | ProSiteProfiles | Thioredoxin domain profile. | 77 | 189 | IPR013766 | - | |
| Hetu2g00031 | 196 | FunFam | Thioredoxin | 80 | 189 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu2g00031 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr2:986473 | Hetu48g01450 | Hetu-Chr48:87161022 | dispersed | |
| Hetu | Hetu-Chr1:1372332 | Hetu2g00031 | Hetu-Chr2:986473 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu2g00104 | Hetu-Chr2:3493249 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu3g00047 | Hetu-Chr3:2518116 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu31g02158 | Hetu-Chr31:123329499 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu32g02164 | Hetu-Chr32:125371041 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu33g02092 | Hetu-Chr33:117752845 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu46g01602 | Hetu-Chr46:88908748 | wgd | |
| Hetu | Hetu-Chr2:986473 | Hetu47g01534 | Hetu-Chr47:93374181 | wgd |