AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00033 ATGAGTCGAAATTCATCTAAACACTCATTCATCTGTCGAAATGTTCACACTTACGGTATTCACAATGCTCCGGTCACCGGATTATTATCTCACCGCCGAGTCATGAGTTTAACTACCACCGGCACCGAGGATTTCAGCAACGCTGTAGACCTCTTCTCTCTTGAGGTGAGATTGGAACGCCTTTCGGCTGGAACAAGAAAACCTGCAAAAAGTGTGTTAGATGATCTGCTTTCGTCTAATGAAGGGGGAAAGCATGACTATGACTGGTTTTTACAGGTTTTTACAGAGTTACCAATTTACCATGATGTAAGGTTTTACCATTTTATTGGTCACAGGCTATTGACTCCACCAGAAACACCTTCAGTTACTTCTTCAAATGGAAAAGAATCTCAACCAAAATCAGTTGCTCCAAGAAGAAATGGTTCAGCTAGATCAGGCTCTACAAATAGAACCTCAAGGCTTTCTGCTTCTCAATCTGAGAGTAACCATCTTTCAAGACCAGCAAGAAGCAGTTCAGTAACTCGCTCATCGATCTCAACCACCCAAAACACAAACAGAAACTCTAATATTCTTAACACCAGCTCTGCTTCCGTCTCTTCTTACATAAGATCATCCACCCCAACTAATCGCTCACCATCAGCTGCCAGACCCTCCACCCGTACAACACCGTCCAGAAGCCCCCCATCCTTCACCACCACTTCCATCGATAGAACCATTAGACCATCAACTCCTACTCCTCGTCCCCAATCACCTACAGTCCGCCCAGCTTCTAGACCATCAACTCCAACGCGTAGGAACCCAAAACCTTCCAATTCTATTTCTCCATCTCTTAACAACCGGAGTGTGGGACCCACATCAAGGCCAAGCTCTCCTGTCTCACGTGTCCGGGCCCCGCCTCAGCCCATCAATCTTCCTGATTTTCCAAACGAAACACCACCAAATCTTAGAACAAGTTTGCCAGAAAGGCCTGTGTCTGCTGGTAGGTCCAGGCCAGGTGTAGCCTTGACTGTGAAGGGAAATGTAGAGAATACAAACACAAGGAGACCGTCATCGCCCATTGTCGCTAGGGGAAGGCTTGCAGAACCATCCGGACGGGGACGGTTGCATGCTAACGGGCATGCGGTTGAATCAACTACAAGAAAACCGACAAAGTTGTTGACTTCGGAGAGTGGTACTGGTACCGGGTTTGGGAGAAGCATCTCGAAGAAATCACTTGACATGGCCATAAAACACATGGATATAAGAAGCGGAGGCACACGTCCACTTTCTGGATCAACGCTCTTTCCTCACAGCATTCGATCTAGTCATGGTTCAAGTGCAAGCAACAATGTTAACTCCAAAAATGGAACTTTTAATAACGGTTATTCAGATAACAGAGTGAAACCCGTGAGCGTAGAACATAAAAGTCCGTATTCTTCTAAACTAACACATGTAGACGTATATGAGAGCTTGAGGTACGACTCGATTTTACTAAAAGAAGACTTGAAGAACACAAGTTGGTTGCACAGTGCAGATGAAAAGAGTGATCAAAGTCCGGTGTTCGATAATGGATTTGAGCCACTCCCTGAACCTTTTGCTCCCATGTGA 1587 45.62 MSRNSSKHSFICRNVHTYGIHNAPVTGLLSHRRVMSLTTTGTEDFSNAVDLFSLEVRLERLSAGTRKPAKSVLDDLLSSNEGGKHDYDWFLQVFTELPIYHDVRFYHFIGHRLLTPPETPSVTSSNGKESQPKSVAPRRNGSARSGSTNRTSRLSASQSESNHLSRPARSSSVTRSSISTTQNTNRNSNILNTSSASVSSYIRSSTPTNRSPSAARPSTRTTPSRSPPSFTTTSIDRTIRPSTPTPRPQSPTVRPASRPSTPTRRNPKPSNSISPSLNNRSVGPTSRPSSPVSRVRAPPQPINLPDFPNETPPNLRTSLPERPVSAGRSRPGVALTVKGNVENTNTRRPSSPIVARGRLAEPSGRGRLHANGHAVESTTRKPTKLLTSESGTGTGFGRSISKKSLDMAIKHMDIRSGGTRPLSGSTLFPHSIRSSHGSSASNNVNSKNGTFNNGYSDNRVKPVSVEHKSPYSSKLTHVDVYESLRYDSILLKEDLKNTSWLHSADEKSDQSPVFDNGFEPLPEPFAPM 528
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00033 528 MobiDBLite consensus disorder prediction 256 293 - -
Hetu2g00033 528 MobiDBLite consensus disorder prediction 117 243 - -
Hetu2g00033 528 MobiDBLite consensus disorder prediction 502 528 - -
Hetu2g00033 528 PANTHER GASTRIC MUCIN-LIKE PROTEIN 44 511 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Hetu2g00033 528 MobiDBLite consensus disorder prediction 117 330 - -
Hetu2g00033 528 MobiDBLite consensus disorder prediction 431 458 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00033 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
110548 Hetu28g00746 Hetu2g00033
110816 Hetu29g00900 Hetu2g00033
111023 Hetu2g00033 Hetu30g00789
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3356414 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu46g02700 Hetu-Chr46:160722195
3529082 Hetu Hetu1g00031 Hetu-Chr1:1426937 Hetu2g00033 Hetu-Chr2:1021354
3578604 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu2g00107 Hetu-Chr2:3564113
3579006 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu28g00746 Hetu-Chr28:40018175
3579052 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu29g00900 Hetu-Chr29:49925339
3580302 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu3g00049 Hetu-Chr3:2585777
3580563 Hetu Hetu2g00033 Hetu-Chr2:1021354 Hetu30g00789 Hetu-Chr30:42382413