Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu2g00116 | ATGTCTTCCGTTGCTCCAATTCATCAATCTTATGTTGCCAGAAACACCCGTTGTTGTTTGAATCCTGCTAGACATGTTCCACACCTCCAGTTACTCAACCTAACCCGCAAAAAACTCGTCGATTTTACCGGTTTGTGTATCAGATCAAAGCCAGATTTGTTATCCACCCGGCATGCAGTTCCGGTTGTTCCCTGTGCTGGTGGCGATGGCGGTAGCTCAGGTGTCGGTCACGGCAGTGGCGGTGGAGGTGGCAGTGGCGGTGGCGGTCGCGACTGGAGCAGCGGCGGAAAATCCAATGACTCATCGTCATTCGACAGTTTCGGCCCAATTGGGGCTTTTCTTAGTGGTTGGAGATCTAGGGTTGCAGCTGATCCCCAATTTCCATTTAAGGTGTTAATGGAAGAATTAGTTGGTGTGAGTGCAAATGTGTTAGGTGACATGGCGACTCGTCCGAATTTCGGTCTAAACGAGCTAGATTTCGTGTTCTCGACGTTAGTCGTAGGATCAATCCTGAATTTCACCCTTATGTATTTACTAGCACCCACCATGACATCCGGATCAGCATCATTACCTTTCATATTCGCGAACTCGCCAGCTAGCCACATGTTTGAGCCGGGCGCGTACACACTGGCTAACCGGTTTGGAACATTTGTATACAAAGGAGCCCAGTTTGCAGCCGTGGGTTTCGCTGCTGGTTTAGTTGGAACCGCGTTGTCAAACGGGTTGATCAAGATGAGAAAAAAGATGGACCCTACTTTCGAGTCGCCAAACAAGGCTCCACCAACCGTCTTGAACGCGATCACATGGGCGATCCATATGGGTATAAGTAGTAATTTAAGGTACCAAAGTTTGAATGGAATCGAGTTCATGCTGGCGAAGGGGTTACCTCCGTTGTTGTTCAAAACCTCGGTGGTTGGTTTAAGGTTGGTGAACAATCTTCTTGGTGGGATGACATTTGTTATGCTTGCAAGGTTGACTGGATCGCAAAGTGCGGGTGGAGAAGAAGACAAGATTGGTGATGAAGAGAGTTCAGATGTGGAGAAGAAGTTACTTGTGAATGAAATTCATTCAAAGTGA | 1077 | 47.82 | MSSVAPIHQSYVARNTRCCLNPARHVPHLQLLNLTRKKLVDFTGLCIRSKPDLLSTRHAVPVVPCAGGDGGSSGVGHGSGGGGGSGGGGRDWSSGGKSNDSSSFDSFGPIGAFLSGWRSRVAADPQFPFKVLMEELVGVSANVLGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSGSASLPFIFANSPASHMFEPGAYTLANRFGTFVYKGAQFAAVGFAAGLVGTALSNGLIKMRKKMDPTFESPNKAPPTVLNAITWAIHMGISSNLRYQSLNGIEFMLAKGLPPLLFKTSVVGLRLVNNLLGGMTFVMLARLTGSQSAGGEEDKIGDEESSDVEKKLLVNEIHSK | 358 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu2g00116 | 358 | Pfam | Protein RETICULATA-related | 120 | 287 | IPR021825 | - | |
| Hetu2g00116 | 358 | MobiDBLite | consensus disorder prediction | 71 | 102 | - | - | |
| Hetu2g00116 | 358 | PANTHER | PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED | 54 | 331 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu2g00116 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 266752 | Hetu1g00053 | Hetu2g00116 | |
| 268619 | Hetu2g00116 | Hetu3g00053 | |
| 269354 | Hetu3g00053 | Hetu2g00116 | |
| 415548 | Hetu2g00116 | Hetu31g02161 | |
| 415549 | Hetu2g00116 | Hetu32g02165 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3356481 | Hetu | Hetu2g00116 | Hetu-Chr2:3778154 | Hetu30g00908 | Hetu-Chr30:50124950 | |
| 3528683 | Hetu | Hetu1g00053 | Hetu-Chr1:2765603 | Hetu2g00116 | Hetu-Chr2:3778154 | |
| 3578607 | Hetu | Hetu2g00037 | Hetu-Chr2:1344030 | Hetu2g00116 | Hetu-Chr2:3778154 | |
| 3579766 | Hetu | Hetu2g00116 | Hetu-Chr2:3778154 | Hetu3g00053 | Hetu-Chr3:2798331 | |
| 3580649 | Hetu | Hetu2g00116 | Hetu-Chr2:3778154 | Hetu31g02161 | Hetu-Chr31:123374268 | |
| 3580921 | Hetu | Hetu2g00116 | Hetu-Chr2:3778154 | Hetu32g02165 | Hetu-Chr32:125404587 | |
| 3581215 | Hetu | Hetu2g00116 | Hetu-Chr2:3778154 | Hetu33g02093 | Hetu-Chr33:117813530 |