AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00133 ATGCAACGCCTTGCTCGGAACTTCATCAGTGCTGAAGATCCGGTTGCCTCGAGCCTAAGAAAAAGGAGAACACCACCTGACTCCCTGCAACGGTTAGATTTCGTGACCAACCTGCTGAAAAGGCCTCACTCGCATCCTCCGTCTGCATCTGCATCTAATATCTGCACGCACACACAAATTGATTCATCTGTCACTTTGGAGTATCCAAACACTCCACAAGATCTGTTCTTAGTAGTAGTAGTTAGGTCTGCGCTATCAATGGCGCTCAAACACCATAACTTCTTAACCTTCTGCTTCCTTTTCATCGTCTTCACGATTCACACGGCCACACTCGCTTCTGCCGATGCGATCCAAGGTTGCGGTGGTTTCATCGAGGCGACCTCATCTTTGATCAAGTCAAGGAAACCTACCGATACGAAATTGGACTATTCGCATGTCACGGTTGAGCTGCGTACTGTGGATGGCTTGGTGAAGGAGCGGACACAATGTGCTCCTAATGGTTACTATTTCATCCCTGTTTATGATAAGGGTTCTTTTGTTATCAAAGTTAAAGGACCAGAAGGATGGTCATGGAACCCAGATCAGGTTCCCGTGCTTGTCGATCATGCTGGCTGTAATGGCAACGAAGATATAAATTTTCGGTTTACAGGGTTCAGTATTAGTGGGAAAGTTGTGGGAGCCGTTGGTGGTGCAAGTTGTTCATCTACCAACGGTGGTCCAACAAACGTAAATGTCGAGCTTTTGAATTCCAACGGGGATGTTGTATCTTCTGTTTTTACATCAGTAGCTGGGAGATACTCTTTCACCAATATAATTCCAGGACGATATAACCTACGGGCATCTCATAATGACTTGAGTATTGAAGTTAAAGGCTCAACAGAGGTTGAATTGGGATTTGGAAATATCCAAGTTGACGATGTCTTTTTTGTCACTGGTTATGATATTCGTGGATCGGTAGTTGCACAAGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTAACGATGTTAAGGAAGTGCACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAGAACCGCTCTTTGTCATGCAATATCTGACGTTGATGGAAAATTTAATTTCAAATCAATTCCATGCGGTGTTTACGAGCTTATACCTTATTATAAGGGCGAGAATACAGTTTTCGATGTTTCTCCTCCCTCTGTCACTGTGCCTGTTCAGCATGATCATGCTACAGTATCTGAAAAGTTTCAGGTTACCGGCTTTTCTGTTGGTGGCCGTGTTGTTGATTCCGAGGGCAAGGGAGTCGATGGCGTAAAAATTGTGGTGGATGGTATTGAGAGGTCTGTTACTGATAAAAACGGATATTATAAGCTCGACCAGGTTACATCCAAACAGTATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGATTGACTTCATGGTTTTACCAAATATGGCATCGGTTGCTGATATCAAAGCAGTGTCTTATGATGTTTGTGGCTCAGTGCACACAGTTGATTCTGGTTACAAATCAAAAGTGGCTCTGACTCATGGACCAGATAATGTTAAGCCGCAAATGAAACAAACTGATGATAACGGCTATTTTTGCTTTGAGGTTCCACCCGGTGACTATCGATTATCGGCTATTGCAGTCACACCTGAAACTACACCGCATCTTTTATTCTCACCACCACATATTGATGTTAACGTCAATGGTCCACTGCTGTCACCGAAATTTTATCAGGCACAAGTTAATGTAGGTGGCTCGGTAACTTGCAAAGAAAATTGTGATTCATCTGTTTCTGTTGATCTTGTGAGATTGGGTGCTAAAAGAAATGAAGAAAGGCAGACAGTCGGTTTGACTTTGACTGACCAAAATAGTGAATTTTTGTTTGAAAATGTCCTACCTGGAAAATATAAGCTTGAGGTCAAACACGTTTCTAAAGGAGCTAAATCTGGAGAAGATAACTGGTGTTGGGAACAGAGCTCGGTACCTCTTGATGTTGGAACCGAAGACGTTAAAGGGGTTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCTACTCACGATGTAGATGCTTATCTGCATCAATCTCATGGTTCACGTGTGGATCTGAAAATTAAGAAAGGTTCTCAGCGCATATGCGTTGAATCTCCTGGAGTGCATGAACTTCACTTTGTAAACTCGTGTATACTTTTCGGGAACTCACCTGTGAAAATTGACACGGCCAATACATTGCCTATCTATCTGAAAGGAGAGAAGTATCTACTTCAAGGAGAAATTAAGGTTGACTTGACCTCACAAAATGGCATTGACCAGTTACCGAAAAATCTAGTCGTTGAGATTTTGAACGATGAAGGAACGGTTATCGATGGCACTACTGCAAAAGTTGTTAATGAGAACGAACAATCAAATAAAGCTCTTTATGAATATAAAGTATGGGCAAATCCTGGAGAAAAACTTACATTTGCACCCCGTGATATTCGGAGCGGAAATGAAAAGAAGATTTTATTTTATCCTAGACAACATCAGGTCAAAGTGGGACAAGACGGCTGTCAAGCGCTACCTCCGTTTTCCGGACGACTCGGGTTGTACATTGAAGGATCGGTTTCTCCCCCACTTCCCGATGTTATTATTCGCATCATAGCTTCCGGAGATAGTCAAAATGGTCAAATCAAGAAAAACGATTTGGCATTCGAAACGACTACAAATGCAGACGGGTTGTTCGTTGGTGGACCCCTATATGATGACATCACCTACCATACCCAAGCTTCAAAGGCCGGTTATCATGTAAAGGAACTTGGATCAAATTCCTTTTCGTGTCAGAAGCTAGGGCAAATCTCAGTTCGTATACATTCTAAAGAAGGTGCCAGTGATTTATTTCCGTCGGTATTGCTATCGTTAAGCGGGGAAGATGGTTATAGGAATAATTCGATATCCGCTGCTGGTGGAACTTTCGTATTTGATAATTTATTTCCTGGAAGTTTTTATCTCCGTCCTCTGTTAAAAGAGTATGCTTTCTCACCATCCGCACAAGCAGTTGAACTCGGGTCCGGTGAGTCTACCGAAGTCGTCTTCCACGCCACACGTGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGCGTTTCGGTCGAAGCCCGTTCCGACTCAAAAGGTTATTATGAAGAAACCATCACAGATTCATCGGGAAGTTACCGTCTAAGGGGACTTCATCCGGATACGACTTACACGATAAAAATAGCAAAGACAAACGCGTTTGGCTCCTCTAACATCGAACGTGCTTCCCCAGAATCTGTTGAAGTCAAGGTTGGATACGAAGATATCAAGGGGTTAGACTTTTTGGTTTTCGAGCAGCCAGAAATAACCTTATTAACTGGAACGGTTCAAGGAAGCGGGAATAAAGAGTTGCATGAACACCTAAAGTTGGAAATTAGATCGGCTAGTGATCCATCAAATATCGAATCGTTGTTACCTTTGTCTATTTCAAACTTCTTCCAGGTAAAGGGTTTGCCTAGGGGCAAACATCTTCTGCAGCTTCGGTCTACGTTAACACCACGCACCCTCAGATTCGAATCTGACGTCATTGAAGTTGATTTGGAGAAAAATACCCAAGTTTATGTGGGTCCCTTGACGTACAGAGTTGAAGATGATCACCACAAACAGGAGTTGACTCCGGCACCTGTGTATCCACTCATTATTGGAGTATTAGTGATTGCGTTATTTATCAGCATGCCAAGATTAAAAGACATGTACCAAAGCAATGTAGGAGTACTGGTACCGGGACCCAGTGCCACGACGAAGAAAACCGTGCGAAGAAAGACTTACTAA 3861 42.86 MQRLARNFISAEDPVASSLRKRRTPPDSLQRLDFVTNLLKRPHSHPPSASASNICTHTQIDSSVTLEYPNTPQDLFLVVVVRSALSMALKHHNFLTFCFLFIVFTIHTATLASADAIQGCGGFIEATSSLIKSRKPTDTKLDYSHVTVELRTVDGLVKERTQCAPNGYYFIPVYDKGSFVIKVKGPEGWSWNPDQVPVLVDHAGCNGNEDINFRFTGFSISGKVVGAVGGASCSSTNGGPTNVNVELLNSNGDVVSSVFTSVAGRYSFTNIIPGRYNLRASHNDLSIEVKGSTEVELGFGNIQVDDVFFVTGYDIRGSVVAQGNPILGVHFYLYSNDVKEVHCPQGSGNPSGDRTALCHAISDVDGKFNFKSIPCGVYELIPYYKGENTVFDVSPPSVTVPVQHDHATVSEKFQVTGFSVGGRVVDSEGKGVDGVKIVVDGIERSVTDKNGYYKLDQVTSKQYLIEAKKEHYKFDKLIDFMVLPNMASVADIKAVSYDVCGSVHTVDSGYKSKVALTHGPDNVKPQMKQTDDNGYFCFEVPPGDYRLSAIAVTPETTPHLLFSPPHIDVNVNGPLLSPKFYQAQVNVGGSVTCKENCDSSVSVDLVRLGAKRNEERQTVGLTLTDQNSEFLFENVLPGKYKLEVKHVSKGAKSGEDNWCWEQSSVPLDVGTEDVKGVNFVQKGYWVNLVSTHDVDAYLHQSHGSRVDLKIKKGSQRICVESPGVHELHFVNSCILFGNSPVKIDTANTLPIYLKGEKYLLQGEIKVDLTSQNGIDQLPKNLVVEILNDEGTVIDGTTAKVVNENEQSNKALYEYKVWANPGEKLTFAPRDIRSGNEKKILFYPRQHQVKVGQDGCQALPPFSGRLGLYIEGSVSPPLPDVIIRIIASGDSQNGQIKKNDLAFETTTNADGLFVGGPLYDDITYHTQASKAGYHVKELGSNSFSCQKLGQISVRIHSKEGASDLFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFHATRVAYSAMGVVTLLSGLPKEGVSVEARSDSKGYYEETITDSSGSYRLRGLHPDTTYTIKIAKTNAFGSSNIERASPESVEVKVGYEDIKGLDFLVFEQPEITLLTGTVQGSGNKELHEHLKLEIRSASDPSNIESLLPLSISNFFQVKGLPRGKHLLQLRSTLTPRTLRFESDVIEVDLEKNTQVYVGPLTYRVEDDHHKQELTPAPVYPLIIGVLVIALFISMPRLKDMYQSNVGVLVPGPSATTKKTVRRKTY 1286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00133 1286 Gene3D Immunoglobulins 1049 1113 IPR013783 -
Hetu2g00133 1286 SUPERFAMILY Carboxypeptidase regulatory domain-like 419 511 IPR008969 -
Hetu2g00133 1286 SUPERFAMILY Starch-binding domain-like 1036 1124 IPR013784 GO:0030246(InterPro)
Hetu2g00133 1286 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 106 1264 IPR051417 GO:0005789(PANTHER)
Hetu2g00133 1286 SUPERFAMILY Cna protein B-type domain 962 1021 - -
Hetu2g00133 1286 Gene3D - 420 499 - -
Hetu2g00133 1286 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 866 940 IPR055073 -
Hetu2g00133 1286 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 137 213 IPR055075 -
Hetu2g00133 1286 Gene3D Immunoglobulins 233 306 IPR013783 -
Hetu2g00133 1286 FunFam Carbohydrate-binding-like fold 234 306 - -
Hetu2g00133 1286 SUPERFAMILY Cna protein B-type domain 234 285 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00133 K26500 BOS complex subunit NOMO
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Event-related genes

Select Gene_1 Gene_2 Event_name
266762 Hetu1g00073 Hetu2g00133
268625 Hetu2g00133 Hetu3g00068
269360 Hetu3g00068 Hetu2g00133
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3523623 Hetu Hetu45g02599 Hetu-Chr45:153470014 Hetu2g00133 Hetu-Chr2:4177202
3528699 Hetu Hetu1g00072 Hetu-Chr1:3327577 Hetu2g00133 Hetu-Chr2:4177202
3578621 Hetu Hetu2g00054 Hetu-Chr2:1793292 Hetu2g00133 Hetu-Chr2:4177202
3579779 Hetu Hetu2g00133 Hetu-Chr2:4177202 Hetu3g00068 Hetu-Chr3:3283734