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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00151 ATGAAAAAAACAGGATTGAGATCGGATGTGAGCCGTAGAGCTTGGCGCTTACTTCGGTTAGCGTTGTTATGGGCTAGAAAGGGTGGAGTATTTGTGCTCAAGAAAAGGCTTATGCTTGACTTGTCACACTATATCAAGAGTCTTGGACAGTCTAAAAAAGGGAATGGTGCATTGCAATATGGTGACCGGCAGCTATCGTTTGACGCGACGCCTATGATTCATGTTAGGATGCACCGACCGAATTCTATGAGGTTTAGGTTGCCTCACATTCCTTGTATTAATCCACACGTTGAGTGTTCTGATCATTTGTTTGATTTTGATGATGAGAGTGAGGGGTACTCGTGTTGTGAAGCGAGAAAGAGTTTCTTGATTGGGAATCACGAAGAATATGATGAAGAAGAAGATGATGACGACGAATATGATCAGATTAAGTGTGAGGAACAAACAATGGGGATTGATCTTAGGGCTGAAGAGTTTATAGCTAACTTCTATGAGCAGCTTAAGCTTCAAAGGCAACATACCACTAGAAGAAGACGCGACTAG 543 42.36 MKKTGLRSDVSRRAWRLLRLALLWARKGGVFVLKKRLMLDLSHYIKSLGQSKKGNGALQYGDRQLSFDATPMIHVRMHRPNSMRFRLPHIPCINPHVECSDHLFDFDDESEGYSCCEARKSFLIGNHEEYDEEEDDDDEYDQIKCEEQTMGIDLRAEEFIANFYEQLKLQRQHTTRRRRD 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00151 180 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 9 175 - -
Hetu2g00151 180 Pfam Cotton fibre expressed protein 152 173 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00151 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266770 Hetu1g00092 Hetu2g00151
268633 Hetu2g00151 Hetu3g00084
269368 Hetu3g00084 Hetu2g00151
415559 Hetu2g00151 Hetu31g02183
415560 Hetu2g00151 Hetu32g02196
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3323018 Hetu Hetu1g00092 Hetu-Chr1:3703674 Hetu2g00151 Hetu-Chr2:4625538
3356514 Hetu Hetu2g00151 Hetu-Chr2:4625538 Hetu3g00084 Hetu-Chr3:3581457
3455843 Hetu Hetu2g00150 Hetu-Chr2:4620603 Hetu2g00151 Hetu-Chr2:4625538