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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00158 ATGGTAGGTCTAAAAAGATACTGGTGGAGGAGAAGCTACCGCCGTCTCGGCACCACCACCGATGAATCGCGATCAAAGCGGAAGTGGTCATGGAAGATAAGGATGCCACGAAGGCTGAAGATAAAGCTGAGGTTTAAGTTTAACCCCAAGAAGTTGACTGCTAATGTTCATGAAGCATACGTGAGAATGATGATGAGGATAGCGAGTTCGCCGGTCGTGAGAAGCGGATCAATAGGCGGGTATGGTGCAGGAGGGTTCAGTCAGTTTGGGATGAGACCCATGAAGGAGTACGACGAGAAGGTGATAATTCAGATGTATAACTCGTTGGTTGTGAGACAGGCTCAACTCAAAGCACTCGAGGCCGAGCCTGTTACCGGTAACTCTCGATCATGTGTTGTCTAA 402 48.76 MVGLKRYWWRRSYRRLGTTTDESRSKRKWSWKIRMPRRLKIKLRFKFNPKKLTANVHEAYVRMMMRIASSPVVRSGSIGGYGAGGFSQFGMRPMKEYDEKVIIQMYNSLVVRQAQLKALEAEPVTGNSRSCVV 133
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00158 133 PANTHER BNAA09G40010D PROTEIN 3 117 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00158 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266774 Hetu1g00097 Hetu2g00158
268638 Hetu2g00158 Hetu3g00090
269373 Hetu3g00090 Hetu2g00158
415562 Hetu2g00158 Hetu32g02197
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3323022 Hetu Hetu1g00097 Hetu-Chr1:3820121 Hetu2g00158 Hetu-Chr2:4770544
3356446 Hetu Hetu2g00071 Hetu-Chr2:2240474 Hetu2g00158 Hetu-Chr2:4770544
3356520 Hetu Hetu2g00158 Hetu-Chr2:4770544 Hetu3g00091 Hetu-Chr3:3770624
3455844 Hetu Hetu2g00157 Hetu-Chr2:4755659 Hetu2g00158 Hetu-Chr2:4770544
3455845 Hetu Hetu2g00158 Hetu-Chr2:4770544 Hetu2g00159 Hetu-Chr2:4776528