AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00164 ATGGAATCAAAGGGCACGAGATTTGCCTCGATTGTTCTTTTGTCGTTGGCGGTGGTGTTGTTTGCTTCTGTTTCGGCGGACGGTGGTTATGGGAAGTCGCAACTAGAGGGATATACGCCATCAAAACCAGCTACACCAAAAGAAGAGACGGGGTATGAAAAACCGAATCCTAAGTTACCAACAATGCCTAAGATGCCGACGAAACCTGTGGTACGCAAAGAGGAGCATGGAGCATATGAGAAGCCCAAGCCTAAGTTACCAACAAAGCCCGAGGTACCAAAATATGATCAGGAAAGTTATCAAAATAACTATCCTAAGGTACCAACAACCAAAAAGCCGTTGGTACCCAAGGTGCCAGAACACCCGAAGAATATAGCGGTTCAAGGTCTTATTTATTGTAAATATGGTTCCAAACTCCTCCCGATTCAAGGAGCTACTGCGAGAGTGACTTGTTTGGCGGTGCACAAGAACGGATATGAATCTGCACCATTTTCATTCTCGAGTTGTCCAGCAGACAAAAAGGGTTACTTCTTGGCCAAACTACCATCATCGATGCTTGTGAAGGATGATCTATGGGAGATCACAGAATGCAAGGCTTTCCTTGAAAACTCGCCATGGACGAGCTGCAACGTTCCAGAAGATACCAACGGAGGAATTAAGGGTGTTCGTGTTACATTTTCTCGTCATCTCAACAGCAGCGGATTTTGTTTGTCATCGGTAGGCCCTTTTATATACACTCCGGGACCCAAAGAAGGTTACTAG 762 45.54 MESKGTRFASIVLLSLAVVLFASVSADGGYGKSQLEGYTPSKPATPKEETGYEKPNPKLPTMPKMPTKPVVRKEEHGAYEKPKPKLPTKPEVPKYDQESYQNNYPKVPTTKKPLVPKVPEHPKNIAVQGLIYCKYGSKLLPIQGATARVTCLAVHKNGYESAPFSFSSCPADKKGYFLAKLPSSMLVKDDLWEITECKAFLENSPWTSCNVPEDTNGGIKGVRVTFSRHLNSSGFCLSSVGPFIYTPGPKEGY 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00164 253 PANTHER OS01G0164075 PROTEIN 12 248 - GO:0071944(PANTHER)
Hetu2g00164 253 MobiDBLite consensus disorder prediction 68 92 - -
Hetu2g00164 253 MobiDBLite consensus disorder prediction 28 116 - -
Hetu2g00164 253 Pfam Pollen protein Ole e 1 like 127 221 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00164 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266777 Hetu1g00103 Hetu2g00164
268641 Hetu2g00164 Hetu3g00096
269376 Hetu3g00096 Hetu2g00164
415565 Hetu2g00164 Hetu31g02189
415566 Hetu2g00164 Hetu32g02209
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3528720 Hetu Hetu1g00103 Hetu-Chr1:3889601 Hetu2g00164 Hetu-Chr2:4822684
3578639 Hetu Hetu2g00077 Hetu-Chr2:2300999 Hetu2g00164 Hetu-Chr2:4822684
3579800 Hetu Hetu2g00164 Hetu-Chr2:4822684 Hetu3g00096 Hetu-Chr3:3819724
3580664 Hetu Hetu2g00164 Hetu-Chr2:4822684 Hetu31g02189 Hetu-Chr31:125619641
3580936 Hetu Hetu2g00164 Hetu-Chr2:4822684 Hetu32g02209 Hetu-Chr32:127693635
3581229 Hetu Hetu2g00164 Hetu-Chr2:4822684 Hetu33g02161 Hetu-Chr33:120606551