AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00165 ATGACTACACATGGCCTAAGCATCGACAACAAAATAGCTGTCATTGCTGTACTTTATAGAATCGGCAGACCTAGCCATTTTCTTTCTAGGATAAGAACAGTTTCAATACGTCAAGTTAAATTACTTCGAGAGGCTGTAAATGATTATGCAGAACATAATGCAAGACCAGTACAACCAGACAATCTACGAGACATTCTTCTATATGCCCAGGCTCGAGAGAGGAAATAG 228 39.47 MTTHGLSIDNKIAVIAVLYRIGRPSHFLSRIRTVSIRQVKLLREAVNDYAEHNARPVQPDNLRDILLYAQARERK 75
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00165 75 SUPERFAMILY Carbonic anhydrase 7 68 IPR036398 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00165 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3356526 Hetu Hetu2g00165 Hetu-Chr2:4850422 Hetu32g03523 Hetu-Chr32:200604408
3528721 Hetu Hetu1g00104 Hetu-Chr1:3999778 Hetu2g00165 Hetu-Chr2:4850422
3579801 Hetu Hetu2g00165 Hetu-Chr2:4850422 Hetu3g00098 Hetu-Chr3:3862545