AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00237 ATGGTTGGTGACTTCGCGATAGCAGCTGTTACTGCTATCCGTGAACTATGTGGAGGAGGTGTTGTTTTCGGTTTGGTTCAAAACACCTTAAAACTGTCACAACATGATGATACAACTCTTGCAAGTGTCGTTGACAGGCTTAAATCAAAAGTTTTATCTATAATGTTACTTCTTTGTCGAGCAGAAAGCTCATCTTTCGTGAATATGGCTTCCAGAACCCCTCAAAGCAAGGGTTTTGCTCATTCAGCAGTTTTGAAGGTCATTGAAGTGCTAGATATGATGTGTAACGGGGATTTTAAAAGCCAAACAAGGGGACTTTTGCATCTGAATGCAATGCAAGTAACAGAAATATTCTCCGGTGCTTCTAGATTCAAAACTTTCGTAGTCTGTAACTTGACAAAACTTTTGACCCGAGTGCTTTCACAACCACAAAGAGAGTTCTTATCTAGTTGGTGTTCCGATGATCGTAAGCCTGCTGAAGAGGAGATTGTTGTGGATTTTAATCCAACATCAGCCGCTGGACATGTATTGGGTTTGACCTCCGAATTCAAAGTCCAACATTCTACTTGGAGTAACTTTCAGGCTCCTCAAACTCCTTTCACGGTTCAGAGGTCATTGTTACTGGTCAAAGTTATAGCCAATCTCACACGTTATGACCCCGATCTATCTGAAGAGGACAATGCTCGCTTTCTCAACGAGTTTCTCGAGTGCTTGCAAACGGAATCTTCTAAGTTACCTGGCGGTGCTGCTGAAAGAACAGATGCTGCAAGAAAAAACCTATCGTCCTTATTAGCTCGTGCAGAATCTATGACTCCTATTTATCTACATGCAGAAGATGTGAATTTTCTCAGGTGGTTCATTAATCAACTGGAGAAAGCACGTACGGCTCAAGAATCCGCTAGCCACAAAGTTATGGTAAAAGTAATTCATACTTTGTCTGTTTATTGGGAGGTTCATAACAACATCCAATGCCCATCACCTACACCACAAAGCCCATCTTCAAAAGAACATGACACAACCGGTAACCATGAAGAGGGCCCATCCGTAACACTTCGGACAAAGAAAAGGAAAAGAAGCAGGAGGATAGATTTAGGTGATATTAGTGTGGATCGGAACATTGAACCGTTTAATAGCGTCATAGATGTTGAAGAGCTTCGAAATGTGCGTAGCGAGGAAACGCAACAAAAGAACAAGAGAAGAACCATAATGAGCTATGAGCAAAAGGGGTTGAATAACCGCAAGGCCAAACGAGCCCGCGAAGCTGCTATGGATTCGGATGGGGACGATGCTGTGACTGAAAACCAAACTGGTTGCGACTCATCACACCACAAGATAGCCTTAGACAACAAAAATGCAATTTCCAAAGTTTTGGAAACTGTCCTGATCACGTCCGGGCCCACAAACGAGATCGGGATGGTCACATCCTTAAAAATATGTGGGCCCGGTTTGGAAAACAGCCGCCGGAGTTCTTCCTGGCTGGCTTTTCCAGTAGGCAACATAGTTGACCTCACAAGAACGTTGTCGGGTGGTGTCGAACAGATTCATCGTGAAACATCCGGTTGCAAGCGGAGGGACAAAGTTTGCGGTTTCGTGGAGGAGAAGGGGGAATAA 1611 43.82 MVGDFAIAAVTAIRELCGGGVVFGLVQNTLKLSQHDDTTLASVVDRLKSKVLSIMLLLCRAESSSFVNMASRTPQSKGFAHSAVLKVIEVLDMMCNGDFKSQTRGLLHLNAMQVTEIFSGASRFKTFVVCNLTKLLTRVLSQPQREFLSSWCSDDRKPAEEEIVVDFNPTSAAGHVLGLTSEFKVQHSTWSNFQAPQTPFTVQRSLLLVKVIANLTRYDPDLSEEDNARFLNEFLECLQTESSKLPGGAAERTDAARKNLSSLLARAESMTPIYLHAEDVNFLRWFINQLEKARTAQESASHKVMVKVIHTLSVYWEVHNNIQCPSPTPQSPSSKEHDTTGNHEEGPSVTLRTKKRKRSRRIDLGDISVDRNIEPFNSVIDVEELRNVRSEETQQKNKRRTIMSYEQKGLNNRKAKRAREAAMDSDGDDAVTENQTGCDSSHHKIALDNKNAISKVLETVLITSGPTNEIGMVTSLKICGPGLENSRRSSSWLAFPVGNIVDLTRTLSGGVEQIHRETSGCKRRDKVCGFVEEKGE 536
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00237 536 MobiDBLite consensus disorder prediction 323 357 - -
Hetu2g00237 536 PANTHER NODULIN HOMEOBOX 14 346 IPR039325 GO:0003697(InterPro)|GO:0009908(InterPro)
Hetu2g00237 536 MobiDBLite consensus disorder prediction 337 352 - -
Hetu2g00237 536 MobiDBLite consensus disorder prediction 422 442 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00237 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
105295 Hetu12g01366 Hetu2g00237
106563 Hetu16g00009 Hetu2g00237
106799 Hetu17g00007 Hetu2g00237
266800 Hetu1g00193 Hetu2g00237
268665 Hetu2g00237 Hetu3g00182
269401 Hetu3g00182 Hetu2g00237
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:7908659 Hetu2g00237 Hetu-Chr2:8520817 dispersed
Hetu Hetu-Chr2:8520817 Hetu3g00187 Hetu-Chr3:7837277 dispersed
Hetu Hetu-Chr2:8164077 Hetu2g00237 Hetu-Chr2:8520817 proximal