AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g00268 ATGGTCTCTCTCCGCTTCCCCTTCTTCTCTCACTCCACCACCACCACCCCACGCTTCCCCTCCTTTACATTTTCTCCGGCCACCATCGCCTGCTCCATCGCCGTCGGCGGCGCCATTTCCGCCGGCATTTCCATCTCAAACAACACCAACTCATCTCTTCTCAACTCCTTCATCTCCAATTTCTCCCGCTCTTCTCCTCTTTGGGGATCACTCTCACTCTCCGACGCCCCTCCCGCCATCGTCACCGAATCCAAGACCGGCGTCTCGTTTCCGGCCGTTTTGAACGAATCGCAGGGGCTGTTGGGGATTGGATTGAGGAAGAAGGCGGTGCTTGGGTTGAAGAACATCGATGTTTACGCTTTTGGTGTGTATGCTGATGATAATGATATAAAGAAGTTTATAAGTGAGAAATACGGAACACTCTCGACAACTGAACTGAAGAACAAGGACATCACTCAAGATTTGATGGAGAGTGATGTAAGTGTTACAGTTAGACTGCAAATAGTTTACGGAAAGCTCAGCATTCGGTCCGTTCGTAATGCTTTTGAAGATTCTGTGGGTAGCAGATTGAAGAAGTTTGGTGGATCTGATAACAAGGAGTTGCTTCAAAAGTTCACTTCTCAGTTTAAAGACGAATACAAGATACCTCGGGGATCTACCATCGATCTCTCTAAGGAAAAAGGCTATGTGCTCCGGACCGCTATTGATGGAAAAGAGGTAGGAAGTGTCGAGAGCCAACTGTTATGTCGGTCAATCTTGGATCTTTATATTGGTGACGACCCATTTGACTCGAAAGCAAAAGAAGAAATTGACCTCAAACTGGTTTCCGCCGTTACAAAGTAA 843 47.33 MVSLRFPFFSHSTTTTPRFPSFTFSPATIACSIAVGGAISAGISISNNTNSSLLNSFISNFSRSSPLWGSLSLSDAPPAIVTESKTGVSFPAVLNESQGLLGIGLRKKAVLGLKNIDVYAFGVYADDNDIKKFISEKYGTLSTTELKNKDITQDLMESDVSVTVRLQIVYGKLSIRSVRNAFEDSVGSRLKKFGGSDNKELLQKFTSQFKDEYKIPRGSTIDLSKEKGYVLRTAIDGKEVGSVESQLLCRSILDLYIGDDPFDSKAKEEIDLKLVSAVTK 280
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g00268 280 Gene3D - 83 256 IPR016088 -
Hetu2g00268 280 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Hetu2g00268 280 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 278 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Hetu2g00268 280 Pfam Chalcone isomerase like 100 270 IPR016087 -
Hetu2g00268 280 SUPERFAMILY Chalcone isomerase 82 276 IPR036298 GO:0016872(InterPro)
Hetu2g00268 280 Gene3D - 129 270 IPR016089 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g00268 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
266818 Hetu1g00242 Hetu2g00268
268687 Hetu2g00268 Hetu3g00237
269423 Hetu3g00237 Hetu2g00268
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:9427785 Hetu2g00268 Hetu-Chr2:9572164 wgd
Hetu Hetu-Chr2:9572164 Hetu3g00237 Hetu-Chr3:9716061 wgd