Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Hetu2g00270	ATGGATCTCATAAAACAAGAGCTTCTAAAGAAAAGGAAAGCACTCTCGGAGGAAACCGGCGGCCGGAAAGTCTTCAAACGCTCAGAAATCGAACAAAAACGAATCCAAAAGCTTCGGGAAGAAGAAAAACGAGACGCAGAAGCCAAACGCCTCCGTCAAAATCAAATCCAAAACGACTCAAATCCGTCAGATCCGAACACATCAAACCCTAACTCAAACATCGATTCAACAAAATCAAAATCTGAATCCGTTACTTCGTCTTCAAAAGCTCCGATAACCGATGAACAGAAAATAGATTCGTTGAATTTACCGAAACAAGAGGTTATTCGCCGGTTACGGTTTCTGAAACAACCGGTTACGTTGTTTGGAGAGAGTGATGATGACCGGTTGGACCGGTTGAAGTATGTGTTGAAAGCTGGATTGTTTGAGTTAGATGATAGTGATATGACTGAGGGACAGACGAATGATTTTTTGAGAGATATTGTTGAATTGAAGAAGAGGCAGAAGTCAGGGATAATGAGTGAGAGGAAGCGGAGATCGAACGAGGAGAATACGGAGGATAAGGACGGGGGAGGGGGTGAGGATGATGGTAGTGGTGATGGCGGTTCGTCTGGAATGGATCAGGATAAGGATTTTAAGCGGATGAAGGCGAGTTTTAACGAGCTTTGTGATGAGGATAAGATTTTGGTGTTTTTTAAGAAGTTGTTGATTGAGTGGAATCAGGAGTTGGATGAGATGAGTGATGTGGAGAAGAGGACGGCGAAGGGGAAGTCGACGTTTGCGACGTTTAAGCAGTGTGCACGGTATTTGAATCCGTTGTTTAAGTTTTGCAGGAAGAAGGTTCTACCTGATGACATTAGAAAAGCATTAATGCTAGTGGTGAACTGCTGCATGAAGCGGGATTACTTAGCTGCAATGGATCATTACATCAGAATGGCAATCGGGAACGCACCATGGCCCATTGGTGTTACTATGGTTGGTATTCACGAACGTTCAGCCCGTGAAAAGATTTACACCAACAGTGTGGCCCACGTGATGAACGATGAAACAACTAGAAAATACTTGCAGTCAGTTAAACGACTAATGACGTTTTGTCAAAGGCGTTATCCGACAATGCCTTCAAAGGCGGTCGAGTTTAATAGTTTAGCGAATGGTAGTGATTTGCAGGCTTTATTAGCAGAAGAAAAGAGGAATGCAGGTGGAAGTCAACAGCAACAGCAAGAAGATAAGCTTTTCTTGATGCCACCCCCAAAGGATGACTAA	1263	43.55	MDLIKQELLKKRKALSEETGGRKVFKRSEIEQKRIQKLREEEKRDAEAKRLRQNQIQNDSNPSDPNTSNPNSNIDSTKSKSESVTSSSKAPITDEQKIDSLNLPKQEVIRRLRFLKQPVTLFGESDDDRLDRLKYVLKAGLFELDDSDMTEGQTNDFLRDIVELKKRQKSGIMSERKRRSNEENTEDKDGGGGEDDGSGDGGSSGMDQDKDFKRMKASFNELCDEDKILVFFKKLLIEWNQELDEMSDVEKRTAKGKSTFATFKQCARYLNPLFKFCRKKVLPDDIRKALMLVVNCCMKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHVMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQALLAEEKRNAGGSQQQQQEDKLFLMPPPKDD	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	53	95	-	-
	Hetu2g00270	420	Gene3D	-	75	156	IPR036285	-
	Hetu2g00270	420	Gene3D	Functional domain of the splicing factor Prp18	203	373	-	-
	Hetu2g00270	420	Pfam	pre-mRNA processing factor 4 (PRP4) like	108	135	IPR014906	-
	Hetu2g00270	420	SMART	pr04-2	103	155	IPR014906	-
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	28	52	-	-
	Hetu2g00270	420	FunFam	Pre-mRNA-splicing factor 18	76	153	-	-
	Hetu2g00270	420	SUPERFAMILY	PRP4-like	94	138	IPR036285	-
	Hetu2g00270	420	Pfam	Prp18 domain	230	371	IPR004098	GO:0005681(InterPro)\|GO:0008380(InterPro)
	Hetu2g00270	420	SUPERFAMILY	Functional domain of the splicing factor Prp18	206	371	-	-
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	169	195	-	-
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	169	207	-	-
	Hetu2g00270	420	FunFam	Pre-mRNA-splicing factor 18	202	373	-	-
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	28	98	-	-
	Hetu2g00270	420	MobiDBLite	consensus disorder prediction	394	420	-	-
	Hetu2g00270	420	PANTHER	PRE-MRNA SPLICING FACTOR-RELATED	1	382	IPR039979	GO:0000350(PANTHER)\|GO:0005682(PANTHER)\|GO:0008380(InterPro)\|GO:0046540(PANTHER)\|GO:0071021(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Hetu2g00270	K12817	pre-mRNA-splicing factor 18

Event-related genes

Select	Gene_1	Gene_2	Event_name
	266819	Hetu1g00245	Hetu2g00270
	268688	Hetu2g00270	Hetu3g00239
	269424	Hetu3g00239	Hetu2g00270

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Hetu	Hetu-Chr7:45189168	Hetu2g00270	Hetu-Chr2:9611167	transposed
	Hetu	Hetu-Chr1:9537847	Hetu2g00270	Hetu-Chr2:9611167	wgd
	Hetu	Hetu-Chr2:9611167	Hetu3g00239	Hetu-Chr3:9755066	wgd