Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu2g00420 | ATGTCGTCCGCACACCAAGTGTTTGATGAAATGCCGAAGCCAGATTCGACTCCAACACCGATGCCGCCGGTGGATCTTTCGAAGTACTCCAAAAGGGTGCTGTTAAAAACGGTTCTGGATCGTGCAGACGGTGGTGTGGGGTTGGTTGATCAGAGAGTTGTGGTGGGCGGATGGGTTAAGTCGTCGAGAGAAATGAGGAAAGATCCTCTGCCTGCAACTCAACCGCCTGCTGGCGGTGATGCTAAACCGGTTACCGGAGGTAAAGATGTGAGATGCGTTGAAGTTTTTCAGTCACGGATTCCTTTTCTTCGAACCATTATAAAAGTATTCGGTGGGAACACTGCTCACAGTCACAACAAGGAGAAACTCGAATCAATCGGGCCGAAACCAGCACATCCTGCGATTTCAATCTTGCAAATTAGTGATGGTTCGTCTACAATCAGCCTGCAGGTGATGGTGGATTCTTCAATAGCTCCTCCGAGCCAGCTCATGCCTACGGGAACATGTATACTAGCGGAAGGTATTTTGCAGAAGCCGTCATTGCAGGGAAAACATGTGATCGAGCTCAAAGCTGAAAGATTGTTGCATATTGGGATAGTTGATCAAGAGAGTTATCCTTTATCAAAGAAAGGTTTACCTTTGGCTAGATTGAGAGATTGTGCTCACTTTAGACCTCGAACAACCACCGTTGCATCTGTTATGAAGGTACGAAACGGGCTAAATCAAGCCAGTCATACCTTTTTCCAGAATCACGGGTTTATTCATGTGGAGGTTCCGATTATAACTGCCACCAATACTGAAGGATTTTCGGACGTTTTCCAAGTTTCAACTTCAAAACATTCCACTAAAGAACCGAAAAAAGAACCACCTGTTTCAATGGACGATACCGAAAACATTAGTCTCGAAACAATAAAGCGTTCGATTGTTGAAAAAGCCAAAAAAGTTGAAGAACTTAAAAGAAGCGATAGCAATAAAGAAGCACTCGATGTAGCCGTTCAAGACCTTCATAAAACAAACTTATTGGCTGCTGAACTGGAAGCAAGATTGAAGTCAAACTCAAAGCAAAAATCAAAATCAAAGACGGATGATGGGTTCTTTTCTAATCAGGCTTTTCTTACTAGTTCTGGTAGTCTTCATCTTGAAAGCTGCGCGTCGGCACTTGGAAATGTGTATGCATTTGGGCCGAGATTTCAAGCAGATAAATCAGAATCGAAAAAACATTTAGCGGAAAAATGGATGGTTGAAACCGAGATGGCATTCTCAGAACTTGAGGATGCGATGAATTGCGCAGAAGATTTCTTGAAGTTTGTATCCAATTGGATTTCTGAAAATTGTTATGAAAATCTGTTTTTTCTTTCGAAAAGAGTTGACAGAACAATTATCGATCGGTTAAATTCATTGGCATCCACAATATTTGAAAAGATCACGTATACAACGGCAGTAGAAGTTTTGAGCAAGGTTACAGACAGAACTTTTGAAACCAAAATCCAATGGGGTGTTGCGCTAACAGAAGAACACGAAAGTTATCTGGTTGATGAGTTCTACAAGAAGCCCATAATTATTTATGATCATCGTAAAGAATTGAAACCCTTCAATGTGAGATTAAATGACGATGGGAAGACCGTTGCAGCCTTCGATGTGATTATACCAAAGGTTGGAGCTCTCATAAGGGGAAGCCAAAAAGAAGAACGCCTAAGCCATTTAACTAAAAGGATAAAGGAATTAGGATTGAGCAAAGATCAATACGAATGGTATTTAGATCTTCGAAAGCAAGGAACAGTGAAACATTCCGGGTTCAATGTTATGTTTGATGTTATGGTTCTTTTCGCTACTGGCCTTAATGATGTTCGAGATGCTGTTCCATTCCCCCGACATCATGGAAGAATCCATAATTAA | 1896 | 41.56 | MSSAHQVFDEMPKPDSTPTPMPPVDLSKYSKRVLLKTVLDRADGGVGLVDQRVVVGGWVKSSREMRKDPLPATQPPAGGDAKPVTGGKDVRCVEVFQSRIPFLRTIIKVFGGNTAHSHNKEKLESIGPKPAHPAISILQISDGSSTISLQVMVDSSIAPPSQLMPTGTCILAEGILQKPSLQGKHVIELKAERLLHIGIVDQESYPLSKKGLPLARLRDCAHFRPRTTTVASVMKVRNGLNQASHTFFQNHGFIHVEVPIITATNTEGFSDVFQVSTSKHSTKEPKKEPPVSMDDTENISLETIKRSIVEKAKKVEELKRSDSNKEALDVAVQDLHKTNLLAAELEARLKSNSKQKSKSKTDDGFFSNQAFLTSSGSLHLESCASALGNVYAFGPRFQADKSESKKHLAEKWMVETEMAFSELEDAMNCAEDFLKFVSNWISENCYENLFFLSKRVDRTIIDRLNSLASTIFEKITYTTAVEVLSKVTDRTFETKIQWGVALTEEHESYLVDEFYKKPIIIYDHRKELKPFNVRLNDDGKTVAAFDVIIPKVGALIRGSQKEERLSHLTKRIKELGLSKDQYEWYLDLRKQGTVKHSGFNVMFDVMVLFATGLNDVRDAVPFPRHHGRIHN | 631 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu2g00420 | 631 | SUPERFAMILY | Class II aaRS and biotin synthetases | 217 | 625 | IPR045864 | - | |
| Hetu2g00420 | 631 | MobiDBLite | consensus disorder prediction | 65 | 85 | - | - | |
| Hetu2g00420 | 631 | Pfam | tRNA synthetases class II (D, K and N) | 364 | 625 | IPR004364 | GO:0000166(InterPro)|GO:0004812(InterPro)|GO:0005524(InterPro)|GO:0006418(InterPro) | |
| Hetu2g00420 | 631 | PANTHER | ASPARTYL-LYSYL-TRNA SYNTHETASE | 30 | 629 | - | GO:0004816(PANTHER)|GO:0005739(PANTHER)|GO:0006421(PANTHER) | |
| Hetu2g00420 | 631 | Pfam | tRNA synthetases class II (D, K and N) | 225 | 280 | IPR004364 | GO:0000166(InterPro)|GO:0004812(InterPro)|GO:0005524(InterPro)|GO:0006418(InterPro) | |
| Hetu2g00420 | 631 | Gene3D | Bira Bifunctional Protein; Domain 2 | 213 | 631 | IPR045864 | - | |
| Hetu2g00420 | 631 | Coils | Coil | 301 | 321 | - | - | |
| Hetu2g00420 | 631 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu2g00420 | K01893 | asparaginyl-tRNA synthetase [EC:6.1.1.22] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 266498 | Hetu1g00582 | Hetu2g00420 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr2:19425730 | Hetu8g01473 | Hetu-Chr8:61980831 | dispersed | |
| Hetu | Hetu-Chr1:27865062 | Hetu2g00420 | Hetu-Chr2:19425730 | wgd | |
| Hetu | Hetu-Chr2:19425730 | Hetu3g00546 | Hetu-Chr3:25179529 | wgd |