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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu2g01550 ATGGGTCCTATACGCAGAGTCCTGGTATTCTCCATCGTCTTCTTTGCATCGGTGGTTATTGCGGCGGAAATTGCCGTTCCGTTGGTGTTGAACTTTGATTTCCCGGCGGCGGTTTGTTCAGCTCTCAAACCAGCGTACCTCTACCTTCTCATCAACATTATCATTCTCACAATCTCAGCCACCTCATATCACGATAATCAAGAAAACCAGTCACAGCCGTTTCAACAGAGTTTTGGCCTTTTCGACAGTGTACACCAGGAGCCGATTGTCGTACGTGTGGAGGAGGAGATTCTGCCAGCCAGAGAAAAACCGGTAGTTGATTCCCAATGTGCTCAATGGAAACGGATAAAAACCAGTCCGGATGGTGCTAGAGCCCTAAAGGTAGCGACGGAGGTTGCAGGGGAAGACGGCGGCTTTACTAACGGCAGCCGTCACACGCCGCTCAAGAGACACCTCCAGAAATCGAAGACCTTCGAGAACCAGGAAATTAAGAAAAAGAAGGTGGTTAGGAAATCTGTAACCCTCAAAGATCGCACAAACTACGACGACAAAAACCACCCTCCTTCGTCGCCGGATTCCGCTAGGAAAGATGGGTCACTGAGTAAAGACGAGTTGAACCAGCGAGTTGAAGAATTCATAAAAAAGTTTAATAACCAGATGAGGCTGCAAAGACAAACTCTGTCTGTGAAGCAGTACAGAGCCTTGACCAACCGTGGTTAG 720 48.33 MGPIRRVLVFSIVFFASVVIAAEIAVPLVLNFDFPAAVCSALKPAYLYLLINIIILTISATSYHDNQENQSQPFQQSFGLFDSVHQEPIVVRVEEEILPAREKPVVDSQCAQWKRIKTSPDGARALKVATEVAGEDGGFTNGSRHTPLKRHLQKSKTFENQEIKKKKVVRKSVTLKDRTNYDDKNHPPSSPDSARKDGSLSKDELNQRVEEFIKKFNNQMRLQRQTLSVKQYRALTNRG 239
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu2g01550 239 MobiDBLite consensus disorder prediction 175 203 - -
Hetu2g01550 239 PANTHER COTTON FIBER (DUF761) 23 226 - -
Hetu2g01550 239 Pfam Domain of unknown function (DUF4408) 38 62 IPR025520 -
Hetu2g01550 239 Pfam Cotton fibre expressed protein 202 238 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu2g01550 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
268178 Hetu2g01550 Hetu3g01581
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr2:88756820 Hetu51g01682 Hetu-Chr51:77576067 dispersed
Hetu Hetu-Chr1:98292337 Hetu2g01550 Hetu-Chr2:88756820 wgd
Hetu Hetu-Chr2:88756820 Hetu3g01581 Hetu-Chr3:91514358 wgd