AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g00672 | ATGTTGAATCTGAACTGTTCATGCTTCGATTTATGGAATCATGAGCCGCGATCACAAGATTGGGGGAAATTTGAAGAAAGATTCTGTGTAATGGCGAATCGGAATTTGGAGAAATTGGCATCGATTGACGCTCAGTTGAGGCTTTTGGTTCCCGGAAAAGTTTCAGAGGATGATAAGCTTATTGAGTATGATGCGTTGCTGTTGGATAAGTTTCTAGATATTCTTCAAGATTTACATGGTGAAGATCTTAAGGAAACGGTTCAAGAATGCTATGAGCTTTCTGCTGAATACGAGGGAAAGCGTGACCCGAAGAAGCTCGAGGAGCTCGGAAGTGTGTTGACCAGTTTAGATCCAGGGGATTCGATTGTCATTGCAAAAGCTTTCTCTCACATGCTTAATTTAGCCAATCTGGCTGAAGAGGTTCAGATCGCTTGCCGTAGAAGGATCAAGCTGAAAAAGGGTGATTTTGCCGATGAGGCTAATGCGACAACCGAATCGGATATTGAAGAAACTCTTAAGAAGCTTGTGTATAAGCTTAACAAGTCCCCTGAAGAGGTTTTTGATGCACTCAAAAATCAAACTGTTGACTTGGTGTTGACCGCTCATCCGACTCAATCGGTCCGCAGATCTTTACTTCAGAAGCATGGAAGGATCCGTAACTGTCTGGCCCAGTTATATGCTAAAGACATCACTCCCGATGACAAGCAAGAACTCGATGAGGCCTTACATCGCGAAATCCAAGCTGCTTTCCGTACCGATGAGATCAGAAGGACCCAACCGACACCGCAAGATGAAATGCGAGCTGGAATGAGTTACTTTCATGAAACAATATGGAAGGGTGTTCCGAAGTTCTTACGGCGTGTCGACACCGCTCTAAAGAATATCGGGATTAATGAACGTGTTCCGTATAATGCACCTCTTATTCAGTTTTCTTCATGGATGGGTGGTGACCGTGACGGTAATCCAAGAGTGACTCCTGAGGTAACAAGGGATGTTTGCTTACTAGCAAGAATGATGGCTGCAAACATGTACTTTTCGCAGATCGAGGATCTAATGTTTGAGATGTCCATGTGGCGTTGTACCGATGAACTACGAGTTCGAGCTGAAGAACTCTTTCGAACAGCAAGGAGAGATGTAAAGCACTACATAGAGTTCTGGAAACAGGTTCCTCCCACTGAACCTTATCGTGTAATTCTCGGTGATGTAAGGGATAAGTTATATAATACACGTGAACGTGCTCGCCATTTGTTAGCGCATGATATATCCGACATTCCAGAAGAGGCGGTTTACACCAATGTTGAACAGTTCCTAGAACCCCTGGAGCTATGTTACCGATCACTATGTGCGTGCGGTGACCGTGTGATTGCTGACGGAAGCCTTCTAGATTTTCTACGACAGGTGTCGACATTCGGGCTGTCACTAGTGAAACTCGATATACGACAAGAATCCGATCGCCACACAGACGTCCTCGACGCAATCACTCAACATCTGGAAATCGGGTCCTACCGTGAATGGTCTGAAGAAAAACGTCAAGAATGGCTTCTAGCTGAACTCAGTGGAAAACGTCCGCTTTTCGGTTCCGATCTCCCAAAAACCGAGGAAATTAAGGATGTTTTGGACACGTTTGGTGTGTTGGCAGAACTCCCGGCTGATTGTTTCGGTGCTTATATCATCTCAATGGCCACGTCACCGTCTGACGTCCTCGCTGTCGAGCTTCTTCAACGCGAATGCCACGTAAAACAACCGTTACGCGTGGTCCCGCTTTTTGAAAAACTTGCTGATCTGGAAGCTGCCCCTGCCGCTATGGCCCGTCTTTTCTCAGTCGATTGGTACAAAAACCGAATTAACGGGAAACAAGAAGTCATGATCGGGTACTCCGATTCTGGAAAAGACGCTGGGCGGTTTTCTGCTGCGTGGCAGCTTTACAAAGCTCAAGAAGAGCTGAAAAACGTTGCAAAGGAGTTTGGAGTTAAACTTGTTATGTTTCACGGGCGTGGTGGGACCGTGGGCCGAGGTGGTGGGCCCACCCATCTTGCTATCCTGTCCCAACCCGCTGAGACCATTCAGGGGTCGTTAAGAGTCACAGTTCAGGGTGAGGTTATTGAGCAATCGTTTGGTGAGGAACATTTGTGTTTTAGAACGCTTCAACGATTCTGTGCAGCTACACTTGAGCACGGAATGAACCCGCCGATCTCACCGAGGCCCGAGTGGCGTGAACTTATGGACCAGATGGCGGTTGTTGCAACCGAACAGTATCGTTCTATTGTGTTCCAGGAACCACGTTTTGTCGAGTATTTCCGCCTCGCCACACCAGAAATGGAGTATGGGCGTATGAATATCGGAAGTCGCCCATCGAAACGAAAACCGAGTGGCGGCATAGAATCACTTCGAGCCATTCCATGGATCTTTGCATGGACCCAAACCAGGTTCCATCTCCCTGTTTGGCTCGGGTTCGGTGCTGCATTCAAACACGTCATTCAAAAAGACAGCAAGAATCTTCAGATGCTTCAAGAAATGTACAAAACATGGCCTTTCTTTCGGGTCACCATCGATTTAGTTGAAATGGTGTTTGCTAAAGGAGACCCCGGCATTGCTGCCTTGAACGACAAGCTACTTGTTTCTGAAGACTTATGGCCCTTTGGAGAATTGTTAAGAGCTAACTATGAAGAAACCAAAGATTATCTCCTCAAGATTGCTGGACACAAGGACCTACTCGAGGGCGATCCCTACTTGAAACAAAGACTTAAGTTGCGTGATTCATACATCACAACCTTAAACGTTTGTCAAGCGTATACTCTAAAACGGACCCGTGACCCGAATTATCATGTGACCTTAAGGCCGCATATTTCGAAAGAATATGCTGAGCCAAGCAAACCGGCTGATGAACTGATCCACTTGAACCCAACCAGTGAGTATGCCCCGGGTCTGGAGGACACACTCATCTTGACCATGAAGGGTATTGCTGCTGGAATGCAGAACACCGGTTAA | 2988 | 46.62 | MLNLNCSCFDLWNHEPRSQDWGKFEERFCVMANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIACRRRIKLKKGDFADEANATTESDIEETLKKLVYKLNKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCTDELRVRAEELFRTARRDVKHYIEFWKQVPPTEPYRVILGDVRDKLYNTRERARHLLAHDISDIPEEAVYTNVEQFLEPLELCYRSLCACGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQEWLLAELSGKRPLFGSDLPKTEEIKDVLDTFGVLAELPADCFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAMARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELKNVAKEFGVKLVMFHGRGGTVGRGGGPTHLAILSQPAETIQGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRELMDQMAVVATEQYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHVIQKDSKNLQMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWPFGELLRANYEETKDYLLKIAGHKDLLEGDPYLKQRLKLRDSYITTLNVCQAYTLKRTRDPNYHVTLRPHISKEYAEPSKPADELIHLNPTSEYAPGLEDTLILTMKGIAAGMQNTG | 995 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g00672 | 995 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 57 | 995 | IPR021135 | GO:0005829(PANTHER)|GO:0006099(InterPro)|GO:0008964(PANTHER)|GO:0008964(InterPro)|GO:0009507(PANTHER)|GO:0015977(InterPro)|GO:0048046(PANTHER)|GO:0048366(PANTHER) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 250 | 266 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 470 | 490 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 197 | 210 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 793 | 819 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 619 | 639 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 310 | 325 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | PRINTS | Phosphoenolpyruvate carboxylase signature | 661 | 690 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 1. | 198 | 209 | IPR018129 | - | |
| Hetu31g00672 | 995 | Gene3D | Phosphoenolpyruvate-pyruvate domain | 338 | 473 | - | - | |
| Hetu31g00672 | 995 | Hamap | Phosphoenolpyruvate carboxylase [ppc]. | 53 | 995 | IPR022805 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 2. | 621 | 633 | IPR033129 | - | |
| Hetu31g00672 | 995 | Pfam | Phosphoenolpyruvate carboxylase | 64 | 995 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Hetu31g00672 | 995 | SUPERFAMILY | Phosphoenolpyruvate-pyruvate domain | 63 | 995 | IPR015813 | GO:0003824(InterPro) | |
| Hetu31g00672 | 995 | FunFam | Phosphoenolpyruvate carboxylase 1 | 338 | 473 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g00672 | K01595 | phosphoenolpyruvate carboxylase [EC:4.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:28017193 | Hetu50g02512 | Hetu-Chr50:142285206 | dispersed | |
| Hetu | Hetu-Chr24:26369440 | Hetu31g00672 | Hetu-Chr31:28017193 | transposed | |
| Hetu | Hetu-Chr35:2751714 | Hetu31g00672 | Hetu-Chr31:28017193 | transposed | |
| Hetu | Hetu-Chr42:8245854 | Hetu31g00672 | Hetu-Chr31:28017193 | transposed | |
| Hetu | Hetu-Chr17:190023405 | Hetu31g00672 | Hetu-Chr31:28017193 | transposed | |
| Hetu | Hetu-Chr4:6809089 | Hetu31g00672 | Hetu-Chr31:28017193 | transposed | |
| Hetu | Hetu-Chr10:124599535 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr11:126663999 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr12:121826340 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr16:137634301 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr17:129254016 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr18:137120020 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr28:175087812 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr29:165044544 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr30:164740859 | Hetu31g00672 | Hetu-Chr31:28017193 | wgd | |
| Hetu | Hetu-Chr31:28017193 | Hetu32g00732 | Hetu-Chr32:31548332 | wgd | |
| Hetu | Hetu-Chr31:28017193 | Hetu33g00797 | Hetu-Chr33:31417293 | wgd | |
| Hetu | Hetu-Chr31:28017193 | Hetu7g01681 | Hetu-Chr7:68567620 | wgd |