AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g00711 ATGGGGCACACTGGTTCTTCATCTAGAAGAAAACACTCAAATAAAAAGACTCTCAAGGGTTCCCGAAAAAAGAAAAGTAGAAGTAAGTCGAAGAAGCTTCGTCATCGTGACGATTTGGATTCGTCGAGTTCGGATGATGAATCCGCTAGTTCATCGCTTAATTTGTTATCTAGTTCAGAAGGTGAGTATAGAAGTAAAAGGGATCGTTCGCGCTCACGAAGTGGAATAAAGGGTAGTAAGAAACGGAAGAGACGAAGGTACTCGAGTGAGGATAGTAGTGATGATTCGCTACCCGTGAAGAAACGAAAACGGTCGAAAAAAAGTAAAAAGATCAAGAAGAAGAAGAAGAAGAAGAGTTCGAAACACGATGGTTATGTTAGTTCTGCAAGCAGTGATTCAGGAAGCTGCTCGACGTGTAAAGACGAAGATATCAGTAGTGATGAGCTGGGTTCACGCGAGAGGACGAGGGGTAGGTCCAGAGAAAAGCGAAAGGGTCATAGAGATTCAACCAAGGGTAGAACTGGAAATAGGAAGAACAGGAGTGAAGCTAGGAGGTCTATTTCACCAAGCAGCAGTTACGGCAGTGAAAGGATTGAGAATACGACGATGGAAAACAACCCGGTGAGGTTAAGATCGGTTATTACGGTTGCAAACGTAGAGAACGAAGAAGACAACAATATGAAAAATGACGAGCTTAAAGAAGAGACTGTGTATGATTATGATGATTACCCGTCTAGTAAAAGCAATGATAGCGGTGAATTAGACGGTCGTTTTAATTATTCTCCTGATAAAGGAAGTGTGGCTAAAGAAGTAAACTCTGGTTCTATACTTGATGATAATAAGGGAAAAGAGAGCAATGTTTCTGATGATTTGGAGTCAATTTTGAGACAAAAAGCATTAGAAAATTTAAGTAGATTCCGAGGTGGGACTAAAACGAAACCAGTAGCTCCTGTTGATGATAAACCTAAAAGCGATCAAACCGACGTTAAGCAGTTGACACGTGAAACCGTTAGCACGACACCGGTGTCGCAGCCAGTACCACATAGGAGTAGGTTTACGTGGAGACGAGATCCTTCTGCGGCAACAGGGAAAGATGAAAAGGCTGCAACTTACAGCGAGCCGCACTCTAGTGGATCACAGCCAGCTGAACTGAAGTTACCGACGAGCAGGGTAGATAATAAGATATTGAATGAGACATCGATGGTCGATACCGCTAATGTTGACCAAAAGTCAACTGCCGTTGTTGAAACACCCACTTCTGCGCCTAAACAAGAAGGTAGCTCTAAGGAGCAGCAGAATGAAAGCAATGACAACTCGCAGTTTGAGAAGAAGACAATGTCTGTGATGAGGGGTGGTGAAATGGTGCAGGTAAGCTACAAGGTTTACATACCAAACAAAGCACCCGCTTTGGCTAGGAGGAAACTTAAGCGGTAA 1434 43.17 MGHTGSSSRRKHSNKKTLKGSRKKKSRSKSKKLRHRDDLDSSSSDDESASSSLNLLSSSEGEYRSKRDRSRSRSGIKGSKKRKRRRYSSEDSSDDSLPVKKRKRSKKSKKIKKKKKKKSSKHDGYVSSASSDSGSCSTCKDEDISSDELGSRERTRGRSREKRKGHRDSTKGRTGNRKNRSEARRSISPSSSYGSERIENTTMENNPVRLRSVITVANVENEEDNNMKNDELKEETVYDYDDYPSSKSNDSGELDGRFNYSPDKGSVAKEVNSGSILDDNKGKESNVSDDLESILRQKALENLSRFRGGTKTKPVAPVDDKPKSDQTDVKQLTRETVSTTPVSQPVPHRSRFTWRRDPSAATGKDEKAATYSEPHSSGSQPAELKLPTSRVDNKILNETSMVDTANVDQKSTAVVETPTSAPKQEGSSKEQQNESNDNSQFEKKTMSVMRGGEMVQVSYKVYIPNKAPALARRKLKR 477
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g00711 477 MobiDBLite consensus disorder prediction 223 241 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 45 60 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 1 447 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 124 140 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 372 445 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 157 171 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 70 84 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 85 101 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 102 121 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 331 347 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 282 296 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 1 32 - -
Hetu31g00711 477 PANTHER TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEIN 1 335 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 350 371 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 141 156 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 185 222 - -
Hetu31g00711 477 MobiDBLite consensus disorder prediction 314 330 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g00711 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299169 Hetu31g00711 Hetu32g00766
299999 Hetu31g00711 Hetu33g00831
409897 Hetu16g02536 Hetu31g00711
410537 Hetu17g02386 Hetu31g00711
411295 Hetu18g02699 Hetu31g00711
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr16:133816610 Hetu31g00711 Hetu-Chr31:30763516 wgd
Hetu Hetu-Chr17:125749820 Hetu31g00711 Hetu-Chr31:30763516 wgd
Hetu Hetu-Chr18:134801700 Hetu31g00711 Hetu-Chr31:30763516 wgd
Hetu Hetu-Chr31:30763516 Hetu32g00766 Hetu-Chr32:33637255 wgd
Hetu Hetu-Chr31:30763516 Hetu33g00831 Hetu-Chr33:33535201 wgd