Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g00720 | ATGAGAGGATTAATGGGAAAATACCCATCAAGTGATGGCAATGGTGAAGTTGGTGGTGCAAATGGGATCATAAAAACCAACAGAAAATGCAGAGATGTTGTCTTTCTTGTTTTTTTCATTGCTTTTTGGATCGCCATGATTGTTAACTCCAGTTTTGGCTTCAATCAAGGAAACCCATTAAGGCTAAATTTCGGGTTGGATTACAAAGGAAATGTATGTGGAGGCAAACACAAAGATTTCAACCTCCATGAGTTGGAACTCAAATATTACGTTAACCCGAATCAAGTTTACCAAAGCGGATTAAAAAACAGCGGAGCAAAACTCTCTAACGCGCGAACAATATGTTTATTGGATTGCCCAACTCCGTCAGAAGATTCATTGAACTGGGTTTGCGATTACCCCGAAGGAGATATCCGTATTTCATTAGACGATTGGATCGATATGAATTACGATTATTACGCTGACCTAACTCCAGAACTAAGAAACTCTTCTCTTCAGCTTCAAGGTCCTTGTTACCCCGTTATTTTTCCAAGCGTAAACGTTTATTGGACTTGTCAATTTGTTGATCGACCGTCAAACGTGTCGTTAACGCATTGGAAACAATTGAATGGTCTTACCATTGATGATGATATGGTCATAGATAAATCTATTCATAACTCCATTAATCAACGGTCCTCAGTATTGAAGAGATATGTAGCTGATGTTGGAAAATCATGGCCTGTTTTGATTGTGTGCGGAGGACTCTTGCCTCTAGGTTTATCGTTGCTATGGCTTTTAATGATTCGACATTTTGTAACCGCAATGCCATGGGTTACCGTGTTCTTCTTTAATGGCCTTATAATATCAGTCACAATGTTCTACTACTTAAAAGCTGGATGGATTGGAAACGATGCTATCTCACCAATCATTGGTGAACATGATCCGTATTATCACGTTTCCGCAAGGGAGCAACATCATATCCGTGCAGCTGCGTTTCTCATGACTTGTGTTATGATTGTTGCCGTTTTATCATCTATAGCTATCGTTAGACGAATTCTTATGGCAACATCTGTACTCAAGGCAAGTGTAGCTGCCAAGGTGATTGGAGAAGTTCATGCTCTAATAATATTCCCGATTGTACCATATTTAATCCTCGCAGTCTTTTACATGTTTTGGTTATCGGCTGCTCTTAATCTTTTTAGTTCGGGTCAAATAGTCCGCAATGACTGCAACACAAATTGTTGTGCGTACGATCTTAAAGCCAAACGCGTCAGTTGTGACGATTGTTGCGGTTATAGTATCCATTACACCCCTCACATAGCCGCTTCCATTCTGTTCCACTTGTTCGGATGCTATTGGGCCACTCAGTTTATCATCGCGTGTTCTTCAACCGTGATTGCGGGCTCCGTCGCTTCATACTATTGGGCTCGTGGGGAATCTTCAACGACTATTCCGTTTCTTCCGGTTTTTTCGTCAATGAAGCTGCTCATGCGCTATAGCCTTGGCTCGGTGGCTATTGGTTCCTTGATTGTATCGTTTGTTGAGTCGACTCAGTTTATACTCGAGGCTGTTCGCCGGAGACTTAAAGTTGCTGACATCATGCCCGAAAACTGGATTAAAAGAATGTTGTTTTATACTTCGCGGGTTTGCTTGAAATGTATTGAATTGACCGTGAAATCTGTTAACCGCAATGCATACATTATGGTGTGTTGGGGTTTAGGATATGTGGTTGCGACCCTTTTCTTTGCGGTGGTGGAAATGTCGATTGATACGATTATACTTTCGTATTGTCAGGATGCGGAGGAACATCAAGGGACCGCACATTATGCGCCTCCGCTTTTGATCGAAACATTTGATGAACAGAATGAGGTGCAAAGAATTGCACAGTAA | 1869 | 41.41 | MRGLMGKYPSSDGNGEVGGANGIIKTNRKCRDVVFLVFFIAFWIAMIVNSSFGFNQGNPLRLNFGLDYKGNVCGGKHKDFNLHELELKYYVNPNQVYQSGLKNSGAKLSNARTICLLDCPTPSEDSLNWVCDYPEGDIRISLDDWIDMNYDYYADLTPELRNSSLQLQGPCYPVIFPSVNVYWTCQFVDRPSNVSLTHWKQLNGLTIDDDMVIDKSIHNSINQRSSVLKRYVADVGKSWPVLIVCGGLLPLGLSLLWLLMIRHFVTAMPWVTVFFFNGLIISVTMFYYLKAGWIGNDAISPIIGEHDPYYHVSAREQHHIRAAAFLMTCVMIVAVLSSIAIVRRILMATSVLKASVAAKVIGEVHALIIFPIVPYLILAVFYMFWLSAALNLFSSGQIVRNDCNTNCCAYDLKAKRVSCDDCCGYSIHYTPHIAASILFHLFGCYWATQFIIACSSTVIAGSVASYYWARGESSTTIPFLPVFSSMKLLMRYSLGSVAIGSLIVSFVESTQFILEAVRRRLKVADIMPENWIKRMLFYTSRVCLKCIELTVKSVNRNAYIMVCWGLGYVVATLFFAVVEMSIDTIILSYCQDAEEHQGTAHYAPPLLIETFDEQNEVQRIAQ | 622 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g00720 | 622 | PANTHER | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) | 561 | 615 | IPR007603 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Hetu31g00720 | 622 | Pfam | Plasma-membrane choline transporter | 326 | 562 | IPR007603 | GO:0022857(InterPro)|GO:0055085(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g00720 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299174 | Hetu31g00720 | Hetu32g00778 | |
| 300003 | Hetu31g00720 | Hetu33g00842 | |
| 409892 | Hetu16g02524 | Hetu31g00720 | |
| 410532 | Hetu17g02375 | Hetu31g00720 | |
| 411290 | Hetu18g02692 | Hetu31g00720 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:31316913 | Hetu44g02188 | Hetu-Chr44:124412780 | dispersed | |
| Hetu | Hetu-Chr41:110010063 | Hetu31g00720 | Hetu-Chr31:31316913 | transposed | |
| Hetu | Hetu-Chr16:132660553 | Hetu31g00720 | Hetu-Chr31:31316913 | wgd | |
| Hetu | Hetu-Chr17:124354572 | Hetu31g00720 | Hetu-Chr31:31316913 | wgd | |
| Hetu | Hetu-Chr18:133508640 | Hetu31g00720 | Hetu-Chr31:31316913 | wgd | |
| Hetu | Hetu-Chr31:31316913 | Hetu32g00778 | Hetu-Chr32:34191630 | wgd | |
| Hetu | Hetu-Chr31:31316913 | Hetu33g00842 | Hetu-Chr33:34351927 | wgd |