AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g00721 | ATGGCCGCCCTTCTCGAAACCCTAACCGTTCCTCGCGCCACCGGATTCCCCGCGGCTTCTCTAACTCCGATCGCCTCTTCTCCTCTCGCTCAACTCTCCGTTCGCCGGAACTCTCTGCCGGAATCCAGAGCCTCAAAGTTGAAGATCAATTCCTTCAGTTCTTCTGGATCTGTCAGATTGAGGTCGAAGTTCGGCCGTCGTGGCGGACGAATCGTCTGTGAAGCACAGGAAGCACCAGTACAAGTACTTCCTGTGACTGATGGATCATGGCAATCACTTGTTCTGGACTCTGAGCTTCCCGTACTGGTTGAATTTTGGGCTCCATGGTGCGGGCCATGTCGCATGATCCACCCGATCATTGATGAGCTGGCAAAAGAATACAACGGCAAGCTCACTTGTTACAAGGTGAACACTGATGAGAGTCCTTCAATCGCTACCAATTATGGTATAAGAAGCATTCCAACTGTCATCATCTTCAAAGATGGAGAGAAGAAAGAGGCAGTTATTGGTGCTGTTCCGAAATCTACTCTGTGTACTTGCATTGAAAAGTTTTTGTAA | 558 | 49.28 | MAALLETLTVPRATGFPAASLTPIASSPLAQLSVRRNSLPESRASKLKINSFSSSGSVRLRSKFGRRGGRIVCEAQEAPVQVLPVTDGSWQSLVLDSELPVLVEFWAPWCGPCRMIHPIIDELAKEYNGKLTCYKVNTDESPSIATNYGIRSIPTVIIFKDGEKKEAVIGAVPKSTLCTCIEKFL | 185 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g00721 | 185 | CDD | TRX-family | 89 | 177 | - | - | |
| Hetu31g00721 | 185 | PRINTS | Thioredoxin family signature | 101 | 109 | - | - | |
| Hetu31g00721 | 185 | PRINTS | Thioredoxin family signature | 109 | 118 | - | - | |
| Hetu31g00721 | 185 | PRINTS | Thioredoxin family signature | 149 | 160 | - | - | |
| Hetu31g00721 | 185 | SUPERFAMILY | Thioredoxin-like | 74 | 185 | IPR036249 | - | |
| Hetu31g00721 | 185 | NCBIfam | thioredoxin | 86 | 184 | IPR005746 | GO:0015035(InterPro) | |
| Hetu31g00721 | 185 | Pfam | Thioredoxin | 82 | 182 | IPR013766 | - | |
| Hetu31g00721 | 185 | ProSiteProfiles | Thioredoxin domain profile. | 72 | 185 | IPR013766 | - | |
| Hetu31g00721 | 185 | FunFam | Thioredoxin | 76 | 185 | - | - | |
| Hetu31g00721 | 185 | PANTHER | GEO12009P1 | 58 | 185 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Hetu31g00721 | 185 | Gene3D | Glutaredoxin | 81 | 185 | - | - | |
| Hetu31g00721 | 185 | ProSitePatterns | Thioredoxin family active site. | 102 | 120 | IPR017937 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g00721 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 104564 | Hetu10g02358 | Hetu31g00721 | |
| 105002 | Hetu11g02426 | Hetu31g00721 | |
| 105431 | Hetu12g02251 | Hetu31g00721 | |
| 111390 | Hetu31g00721 | Hetu7g01603 | |
| 111391 | Hetu31g00721 | Hetu8g01462 | |
| 299175 | Hetu31g00721 | Hetu32g00779 | |
| 300004 | Hetu31g00721 | Hetu33g00843 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr28:178482738 | Hetu31g00721 | Hetu-Chr31:31362808 | dispersed | |
| Hetu | Hetu-Chr29:172848366 | Hetu31g00721 | Hetu-Chr31:31362808 | dispersed | |
| Hetu | Hetu-Chr30:168457616 | Hetu31g00721 | Hetu-Chr31:31362808 | dispersed | |
| Hetu | Hetu-Chr31:644520 | Hetu31g00721 | Hetu-Chr31:31362808 | dispersed | |
| Hetu | Hetu-Chr31:31362808 | Hetu9g01642 | Hetu-Chr9:66125059 | dispersed | |
| Hetu | Hetu-Chr10:128268932 | Hetu31g00721 | Hetu-Chr31:31362808 | wgd | |
| Hetu | Hetu-Chr11:129656421 | Hetu31g00721 | Hetu-Chr31:31362808 | wgd | |
| Hetu | Hetu-Chr12:124981020 | Hetu31g00721 | Hetu-Chr31:31362808 | wgd | |
| Hetu | Hetu-Chr31:31362808 | Hetu32g00779 | Hetu-Chr32:34204545 | wgd | |
| Hetu | Hetu-Chr31:31362808 | Hetu33g00843 | Hetu-Chr33:34373056 | wgd | |
| Hetu | Hetu-Chr31:31362808 | Hetu7g01603 | Hetu-Chr7:65150727 | wgd | |
| Hetu | Hetu-Chr31:31362808 | Hetu8g01462 | Hetu-Chr8:61526262 | wgd |