AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g00723 | ATGAAACCATACAAAGCGGGCAGATTGGGCTTAATGCCATCCAACGACGTTATGCAAGAGTTTCTACTGGAGATGCGGTATCTGTTATCAGTTTGCAGCTTTTCAACCTCAGTATCGAATTTTTATAATTTGCAGGTTGATGCTGTCCTACTAGCTCAACAGCTTAAGAATAGATTTATAAACCAGACTCGGTATAAAACATGTCAAGGGAATGCTGTTGTACGGTCCCCCTGGTACCGGCAAGACTCTAATGGCTCGCCAGATTGGAAAAATGTTGAACGGAAAGGATCCGAAGCAGAACTCGAAGGTGTTGTGAAAAGTGCGGTTTCTTACGCTCTCAACCGCCAGCTCAGTCTTGACGATTTAACTAAATCGATTGATGAGGACAACATAAAAGTCACGATGGAAGATTTCTTGAATGCTCTTCATGAAGTTACTCCTGCATTTGGCGCTTCAACAGACGACCTGGAACGTTGCAGACTGAATGGAATAGTTGATTGTGGTGAGCGACATGATCATATCTTTAAAAGAACTATGCTATTAGCGGAGCAAGTTAAGGTTAGCAGAGGTAGTCCACTTGTCACAGTTCTTCTAGAAGGTCCAAGTGGCAGTGGTAAGACCGCAATGGCAGCTACTGTTGGTATCGGTAGCGATTTCTCCTATGTGAAGATTATTTCAGCTGAATCGATGATTGGACTCAGTGAAGCCAGTAAATGCGCACAAATCGTCAAGGTATTTGAGGATGCTTACAAGTCAACATTGAGCATTATTGTCCTTGATGATATTGAAAGACTATTGGAATATGTTGCCATTGGCCCTCGGTTTTCAAACTTAATCTCTCAGACATTAATGGTCCTACTCAAAAGGCTTCCTCCAAAGGGTAAAAATCTGCTGGTGATCGGAACAACAAGCGAGGTAACTTTCTTGGAGTCGGTTGGTGTTTGTGATGCTTTCTCAGTCACTTATCACGTTCCTATGTTAAAGACCGAGGATGCTAAAAAGGTATTGCAACAACTTAATGTGTTCTCTCAAGGTGATGTTGATGCTGCAGCTGAGGCTTTGAATGATATGCCACTTAAGAGGCTTTATATGGTGGTAGAGATGGCCGCCCAAGGAGAATCCGGTGGAAGTGCAGAAGCAATTTACTCTGGCAATGAAACAATTCAAATGTCACAATTCTATGATTGCCTCAAAGATATTGTCCGTTACTAG | 1212 | 42.49 | MKPYKAGRLGLMPSNDVMQEFLLEMRYLLSVCSFSTSVSNFYNLQVDAVLLAQQLKNRFINQTRYKTCQGNAVVRSPWYRQDSNGSPDWKNVERKGSEAELEGVVKSAVSYALNRQLSLDDLTKSIDEDNIKVTMEDFLNALHEVTPAFGASTDDLERCRLNGIVDCGERHDHIFKRTMLLAEQVKVSRGSPLVTVLLEGPSGSGKTAMAATVGIGSDFSYVKIISAESMIGLSEASKCAQIVKVFEDAYKSTLSIIVLDDIERLLEYVAIGPRFSNLISQTLMVLLKRLPPKGKNLLVIGTTSEVTFLESVGVCDAFSVTYHVPMLKTEDAKKVLQQLNVFSQGDVDAAAEALNDMPLKRLYMVVEMAAQGESGGSAEAIYSGNETIQMSQFYDCLKDIVRY | 403 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g00723 | 403 | Gene3D | - | 93 | 150 | - | - | |
| Hetu31g00723 | 403 | CDD | AAA | 186 | 304 | - | - | |
| Hetu31g00723 | 403 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 97 | 397 | IPR039812 | GO:0005795(PANTHER)|GO:0006891(PANTHER)|GO:0016887(PANTHER)|GO:0016887(InterPro)|GO:0035494(InterPro)|GO:0043001(PANTHER) | |
| Hetu31g00723 | 403 | FunFam | vesicle-fusing ATPase isoform X1 | 154 | 325 | - | - | |
| Hetu31g00723 | 403 | Pfam | ATPase family associated with various cellular activities (AAA) | 196 | 308 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Hetu31g00723 | 403 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 158 | 367 | IPR027417 | - | |
| Hetu31g00723 | 403 | Gene3D | - | 154 | 325 | IPR027417 | - | |
| Hetu31g00723 | 403 | SMART | AAA-5 | 192 | 330 | IPR003593 | GO:0016887(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g00723 | K06027 | vesicle-fusing ATPase [EC:3.6.4.6] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299177 | Hetu31g00723 | Hetu32g00781 | |
| 300006 | Hetu31g00723 | Hetu33g00845 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr16:132586400 | Hetu31g00723 | Hetu-Chr31:31474428 | wgd | |
| Hetu | Hetu-Chr17:123879707 | Hetu31g00723 | Hetu-Chr31:31474428 | wgd | |
| Hetu | Hetu-Chr18:133033775 | Hetu31g00723 | Hetu-Chr31:31474428 | wgd | |
| Hetu | Hetu-Chr31:31474428 | Hetu32g00781 | Hetu-Chr32:34263472 | wgd | |
| Hetu | Hetu-Chr31:31474428 | Hetu33g00845 | Hetu-Chr33:34471676 | wgd |