AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g00901 ATGGCACCCCTTTCTTCTTCTTCTTCTTCTTCTTTCTCCAAAACCCACTTCACAATCACCCTCCTCATACTCCTCACTTGTATCCTCAATCCCAACGTACAAGCCCTCAAAGCACCAATTCATCCACAAGACATACTCCCACTTTTACCCCATCAAATTTCATGGCCCCTTCTCAACTCTCTCCGGGGCGCCGCCGATCTCCTCCCCAGTTTCGTCGGCGCCGCCGCGGTGGCGAATAATTCCGATTTGCATTGGAAAGGGTCTTGCTTTTATGAGAATACTGCCTGGTTAGAGCTTCATAATAAAAGTGGTAGTCAGTTTGGTGGAGGCACTCTTTATATTAAAGTAAGCAGTGCACACAGTTGGACATGTATGGATATTTATCTATTTGCGACTCCATATCGTGTGACATGGGACTATTATTTTCTTTCCCGTGAGCATACACTCGAGTTTGATGAATGGAGCGGGAAAGCTGAGTACGAATATGTGAAACGTAAAGGAGTTGCAATTTTCCTGATGGAAGCAGGAATGATAGGAACCCTACAAGCATTATGGGAGGTCTTCCCGTTATTCACAAATACAGGTTGGGGGGAGAGTTCCAATCTTGCTTTTCTCAAGAAGCATATGGGAGCTAATTTTGAGGTGCGGCCCGAACCGTGGGTAACAAACATAACCGAAGACGATATTCATTCGGGGGACTTCCTTGCCATATCGAAAATCCGTGGTAGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCATACGCGGGTCACTCTGCTGTTTGCTTGAGGGACCCACAAGGTAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTACCATGGGATGAGTGGTGGGATTTTGAGTTGACTAAAGATGACGCAAATCCACATATTGCTTTGCTTCCTTTGCATCCCGATCTACGGTCCAGATTTAATGAAACTGCTGCTTGGGAGTATGCACAGAGTATGGTCGGGTTGCCGTATGGTTATCATAATTTGATATTTAGTTGGATAGATACCGTCAGTGATAATTATCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACTGTGTGGGATCAAATGCAGCCTGCATATGCGGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTCAGGGGCTTGAACTAGCTGAAATTTTAGTGGAAGTTGAAAGACGTGGTTCATCTTTTGCTGAATTACTAACTATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAGTCAACTTCTTGCGTTGCTTTCGTCCTTGAAATGTACAAAGAAGCAGGACTCTTTGGAGATCTTGCAGACCAAATTCAAGTTACCGAATTCACAATCAAGGATGCTTACACGCTTAACTTTTACGAAAACAATTCAAGCCGCCTGCCAAAGTGGTGCAATGAAGGCGACACGGTTGAACTTCCATTTTGTCAAATTAAAGGAAAATATCGAATGGAGTTACCTGGATACAATACCATTGAACCGTACCCGCATATGACCGAAAGATGCCCATCACTACCCCCAGATTATTCAAGACCCCAGTACTGCTGA 1608 44.59 MAPLSSSSSSSFSKTHFTITLLILLTCILNPNVQALKAPIHPQDILPLLPHQISWPLLNSLRGAADLLPSFVGAAAVANNSDLHWKGSCFYENTAWLELHNKSGSQFGGGTLYIKVSSAHSWTCMDIYLFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKRKGVAIFLMEAGMIGTLQALWEVFPLFTNTGWGESSNLAFLKKHMGANFEVRPEPWVTNITEDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWDFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTQGLELAEILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIEPYPHMTERCPSLPPDYSRPQYC 535
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g00901 535 PANTHER OS01G0793500 PROTEIN 13 535 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g00901 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
108353 Hetu22g02868 Hetu31g00901
108674 Hetu23g02863 Hetu31g00901
109052 Hetu24g03176 Hetu31g00901
299229 Hetu31g00901 Hetu32g00956
300060 Hetu31g00901 Hetu33g01008
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3333233 Hetu Hetu22g02868 Hetu-Chr22:173711702 Hetu31g00901 Hetu-Chr31:40666919
3363333 Hetu Hetu31g00901 Hetu-Chr31:40666919 Hetu50g03617 Hetu-Chr50:209979410
3624430 Hetu Hetu31g00901 Hetu-Chr31:40666919 Hetu32g00956 Hetu-Chr32:44415567
3625073 Hetu Hetu31g00901 Hetu-Chr31:40666919 Hetu33g01008 Hetu-Chr33:43127523