AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g00930 | ATGGCCAAAAGTTCCTTCAAACTGGAACACCCACTAGAGAGGCGCCAAGCCGAGGCTGCACGGATCAGGGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAGAAGGCTGAAAGAAGCGACATACCCGACATAGACAAGAAGAAATATCTGGTCCCTGCTGATCTGACTGTTGGACAGTTTGTTTATGTGGTGAGGAAGAGGATTAAACTGAGTGCTGAAAAAGCCATCTTTATCTTTGTGAAGAACATTCTGCCACCTACTGCTGCCATGATGTCTGCCATCTATGAAGAAAACAAAGACGAGGATGGTTTCCTGTACATGACTTACAGTGGGGAGAACACGTTTGGAGCATGTTGA | 360 | 46.39 | MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC | 119 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g00930 | 119 | FunFam | Autophagy-related protein | 1 | 117 | - | - | |
| Hetu31g00930 | 119 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED | 3 | 117 | IPR004241 | GO:0006995(PANTHER) | |
| Hetu31g00930 | 119 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - | |
| Hetu31g00930 | 119 | CDD | Ubl-ATG8 | 12 | 114 | - | - | |
| Hetu31g00930 | 119 | Gene3D | - | 1 | 118 | - | - | |
| Hetu31g00930 | 119 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g00930 | K08341 | GABA(A) receptor-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 105605 | Hetu13g00091 | Hetu31g00930 | |
| 105846 | Hetu14g00251 | Hetu31g00930 | |
| 106231 | Hetu15g00134 | Hetu31g00930 | |
| 108355 | Hetu22g02882 | Hetu31g00930 | |
| 108676 | Hetu23g02878 | Hetu31g00930 | |
| 109053 | Hetu24g03186 | Hetu31g00930 | |
| 299241 | Hetu31g00930 | Hetu32g00978 | |
| 300072 | Hetu31g00930 | Hetu33g01043 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr13:2192130 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr14:8261964 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr15:3635544 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr22:174677068 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr23:165390036 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr24:199602554 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr29:46104499 | Hetu31g00930 | Hetu-Chr31:41477465 | dispersed | |
| Hetu | Hetu-Chr31:41477465 | Hetu34g01720 | Hetu-Chr34:128767893 | dispersed | |
| Hetu | Hetu-Chr31:41477465 | Hetu32g00978 | Hetu-Chr32:45239997 | wgd | |
| Hetu | Hetu-Chr31:41477465 | Hetu33g01043 | Hetu-Chr33:44134285 | wgd |