AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g00957 ATGGCTTCTTTTACAGTAATCCTCAATCTCTCTCCTACTTTCACTCGTCTTCAATCCTCTCAAAAATCATCTTTCTCTCCATCTCCTTCTCATTCTCCAATCCACCATAACCCTACCTGCCTCGCTCTACAGTCATCTTCCCTCGAATCACCACCGGTTCGTGTTAGGGTTTCACCGCCGTCCGATCCTCGCCAGGATTTCTATGTTAATCTCGGTTTAGCTGTTCGTACTCTCCGCCATGATTTACCTCTCATCTTCTCCACAGATCTCAATTACGAGATTTACAGGGACGATATCACGTTTGTTGATCCGCTCAACAAGTTTACTGGTATCGATAATTACAAGCTAATCTTCCGAGCATTACGTTTCCATGGAAGAATACTGTTTAAGGAGATCTCGTTGGAGATTTATAGGGTTTGGCAGCCGTCCGAGAATCTAATTTTGATTCGTTGGAATCTGAAAGGCGTCCCTCGAGTCCCCTGGGAAGCTAAAGGAGAGTTTCAAGGCACTTCGCGGTATAAATTGGATCGGAATGGAAAGATTTATGAGCATAAGGTTGATAATTTGGCTTTCAATTTCCCGCAGCAGCTCAAACCGGCTATATCTGTTCTTGATTTGGTGGTTGCTAGTCCTGCTACGCCTAATCCTACGTTCTCGTGGGGGATTTTGGATTCGACTTACTCATCGTCGTGGCTAGACTTCTATCGTGCGGTTAGGAACACATTGGATCCTGGTCAAGAGTTTTCGGAGTTGCAAGATTGTCAACTAGTTGCTACTTGTGTATAG 786 44.66 MASFTVILNLSPTFTRLQSSQKSSFSPSPSHSPIHHNPTCLALQSSSLESPPVRVRVSPPSDPRQDFYVNLGLAVRTLRHDLPLIFSTDLNYEIYRDDITFVDPLNKFTGIDNYKLIFRALRFHGRILFKEISLEIYRVWQPSENLILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAISVLDLVVASPATPNPTFSWGILDSTYSSSWLDFYRAVRNTLDPGQEFSELQDCQLVATCV 261
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g00957 261 PANTHER RIKEN CDNA 2310061I04 GENE 20 209 IPR018790 -
Hetu31g00957 261 Pfam Uncharacterized conserved protein (DUF2358) 74 184 IPR018790 -
Hetu31g00957 261 SUPERFAMILY NTF2-like 89 185 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g00957 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300082 Hetu31g00957 Hetu33g01081
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:42659546 Hetu7g00011 Hetu-Chr7:259866 dispersed
Hetu Hetu-Chr31:42659546 Hetu32g01012 Hetu-Chr32:46690460 wgd
Hetu Hetu-Chr31:42659546 Hetu33g01081 Hetu-Chr33:45161525 wgd