Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g01056 | ATGGAGAGATTCGGAGGCGCTGGTGGTGATACTCTACAACTTGATTCGAATTCATCAGGTGGTGCTGTATTTGATGCGTCACAGTATGCGTTCTTTGGTAATGAAGTGCTTGAAGAAATTGAGTTGGGAGGGCTGGAGGATGACGGAGATCTTTCGGAAGCTAAGTTTGAGGATGATGAGCATCTGTTGGAGCAGGAAGAGGGTGTGTTTCCAGGAATTGACGATCTTTCGACAACATTTTTGAAGCTCAACAAAGATGGCATGGGACCAAGCATTGGAGGTTTTGGTGACCGAGGATCCAGAGAAACTTCATCTGCAGCTGACTGGGCACAGGGAGGAGACTACACCAACTGGGTGCTTGATCAAGATAATTTCGAAGCAGAAAGGGGTCAACAACAAACCAATAAATGGTCAAACTCTTCGTTTCCTCTTCAAGATCCATCAACGCTTCTTCACAGAACATCATCCTATGAATCAAACCAATATCTTCACAGAACATCATCGTACCCCGAGCAACATCAACACCACAACCTTAACCAGCACCTGATAGATGAATCAAAGAATCTTCATAGAACATCATCTTACCCTGAACAGCAGCAACACCACCACCTTGGTCAGCAGCATTTGCCTTTCTCTAGTGAACCGGTTCCTGTTCCTAAATCATCCTTCATTTCATACCCTCCTCCAGGTGGCGGTGGGTCCCCCCAATTTTCACCAAATCATCAATCACGCTATCTTAACCCTCCGTATCACCCCACTGGACTCCAAACTGGACCATCCCTTTCCAGTATATCTCCGCAGCTTCAGATGGGTGGGGTGCCACATGGATCACCATTTGGCGGGAATTTTAATCTGCCTCAGTTTCGTCCTCCTGCTCCACCTGTCAATAGCCGGCTACAAAACCAATTTGGTGGGAATTTGCCTGATCTTTCAAATGGTATGATGCAACAACATTTCACTCACAATAACAGTATACCGCCTCAACAACACAGGATGCACCAACAATTTCAGCCGCCTTTTGGTGGTCATTTATCCGGGATGCAGCCGCTAATGAACCAGCATCCACCTCTAATGAACAATTTTGAACCCCTTGGGATTGGTTCAAGAGATTTGAGACCTAAGTCATTGGCCAAAGGTAGACCGGGTCAGGGACCGAGGGGCTTTGACACCAGTGGATGGCCACAGTTCAAATCAAAATACATGACATCTGATGAGATTGAAAATATTCTCAGAATGCAACTTGCTGCTACACACAGTAATGATCCTTATGTAGACGATTACTATCACCAAGCTTGTTTAGCAAACAAATCTAGCGGTGCAAAATTAAGACACCATTTTTGCCCCACCCAATTAAGGGACTGCCCACCCAGAGCCCGTGCTGCTAACGAACCACATGCATTTCTTCAAGTTGATGCTTTGGGCCGGATCTCTTTTTCCTCCATACGCCGTCCCCGCCCACTTCTTGAAGTTGACACACCAAAGTCGACCACTAGTGGGATCACTGATCAGAAATTGTTGGACAAACCTTTGGAACAAGAACCTATGCTTGCAGCTAGAGTCACAATTGAAGACGGTATTTGTCTTCTTCTAGACGTTGATGATATTAACCGTTTTCTACAGTTCAATCAGCTCCAGGATGGTGGGGCCCAGTTACGGCAGAGGCGGCAAGTCCTTCTGGAAGGTTTAGCAACGTCGCTTCACCTTGTTGACCCGTTTGGCAAGAACGGTCAAACGGATGAGTCGGCTCAAAAGGACGATTTCATCTTTTTACGGCTGGCTTCTCTTTCAAAGGGACGGAAGCTAATTTCAAGTTATCTCAAACATCTTGACCCGGGAAGCGAGTTGACTCGTGTGGTTTGCATGACAATTTTCCGCCATTTAAGGTTTTTATTTGGAGTTGTTCCTGTTGATCCACAAGCAGCAGAAACTATTAATAATCTTGTAATAACTGTTTCGTCCTCGGTTCGTGGAATGGAGCTTAGATCACTCGGTACCTGTCTTGCATCTGTTGTTTGTTCTCCAGAGCAGCCCCCACTTCGTCCTGTTGGAAGTCCTGCGGGGGATGGGGCTTCTGTTGTGTTAAAATCTGTACTCGAAAGAGCAACCGAGCTTTTAACCGACCCAAATGCTGCCACGAGCTGCAGCCCAACAAATCGGGATTTTTGGCAGGCATCTTTTGACGCTTTTTTTGGGCTTCTCACCAAATACTGTGTTAGTAAATATGAAAGCGTTGTCCAGTCGTTGCTGAGCCAGGGGTGTGGTCCATCCGAGATGGCGGTTATGGGGTCAGATGCTGCAAAAGCTATTAGTCGGGAAATGCCCATCGAACTCCTACGGGCCAGCCTTCCTCATACAAACGAAAACCAGAGGAAGGTGTTACTTGATTTTGCTCAACGGTCCATGCCTGTTCATAGCGCTTGA | 2421 | 46.59 | MERFGGAGGDTLQLDSNSSGGAVFDASQYAFFGNEVLEEIELGGLEDDGDLSEAKFEDDEHLLEQEEGVFPGIDDLSTTFLKLNKDGMGPSIGGFGDRGSRETSSAADWAQGGDYTNWVLDQDNFEAERGQQQTNKWSNSSFPLQDPSTLLHRTSSYESNQYLHRTSSYPEQHQHHNLNQHLIDESKNLHRTSSYPEQQQHHHLGQQHLPFSSEPVPVPKSSFISYPPPGGGGSPQFSPNHQSRYLNPPYHPTGLQTGPSLSSISPQLQMGGVPHGSPFGGNFNLPQFRPPAPPVNSRLQNQFGGNLPDLSNGMMQQHFTHNNSIPPQQHRMHQQFQPPFGGHLSGMQPLMNQHPPLMNNFEPLGIGSRDLRPKSLAKGRPGQGPRGFDTSGWPQFKSKYMTSDEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRISFSSIRRPRPLLEVDTPKSTTSGITDQKLLDKPLEQEPMLAARVTIEDGICLLLDVDDINRFLQFNQLQDGGAQLRQRRQVLLEGLATSLHLVDPFGKNGQTDESAQKDDFIFLRLASLSKGRKLISSYLKHLDPGSELTRVVCMTIFRHLRFLFGVVPVDPQAAETINNLVITVSSSVRGMELRSLGTCLASVVCSPEQPPLRPVGSPAGDGASVVLKSVLERATELLTDPNAATSCSPTNRDFWQASFDAFFGLLTKYCVSKYESVVQSLLSQGCGPSEMAVMGSDAAKAISREMPIELLRASLPHTNENQRKVLLDFAQRSMPVHSA | 806 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g01056 | 806 | MobiDBLite | consensus disorder prediction | 367 | 395 | - | - | |
| Hetu31g01056 | 806 | PANTHER | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 | 17 | 803 | IPR039900 | GO:0000290(PANTHER)|GO:0000290(InterPro)|GO:0000932(PANTHER)|GO:0003723(PANTHER)|GO:0033962(PANTHER) | |
| Hetu31g01056 | 806 | MobiDBLite | consensus disorder prediction | 190 | 246 | - | - | |
| Hetu31g01056 | 806 | MobiDBLite | consensus disorder prediction | 128 | 149 | - | - | |
| Hetu31g01056 | 806 | MobiDBLite | consensus disorder prediction | 192 | 207 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g01056 | K12617 | DNA topoisomerase 2-associated protein PAT1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299254 | Hetu31g01056 | Hetu32g01092 | |
| 300100 | Hetu31g01056 | Hetu33g01153 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:47602376 | Hetu33g01156 | Hetu-Chr33:49530648 | dispersed | |
| Hetu | Hetu-Chr31:47602376 | Hetu31g01058 | Hetu-Chr31:47883611 | proximal | |
| Hetu | Hetu-Chr31:47546906 | Hetu31g01056 | Hetu-Chr31:47602376 | tandem |