AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g01140 ATGAGCAGCGGCGAGGCTAGGGTTTCCATTCCTCACAACGCCCGTAAACTTATTCAACAAGTCACCAAAACCCTAACCCACAACCACACCGATTCCTTCGTATACTCCACCCTCATCGACTCCGCCATGGATCCTGCCGAAGCTACCCGCAGATTGAAGATGATTCACGACATTCGAGAGATTGCCGGAAAGCACAGCGTTGAGGATGTCTATACAATGCTCAAAGAGTGTAATCTCGATGCTAATGAAGCTGCTCAGAGGCTGTTGTATATCGATACTTTTCATGTGGTTAAAAAGAAACATGACCGGCGAAAAATCATAAACAGTGATGTTTCTCAAGAGAATAAACATACACGGGTAAATCAATGGAGGGGAGATAAGGGTGGGCGTGGGGCTTTCTACGCGTCAAAAGTTTTTGAAGATGTTGGCGGTGGGAGAAATTTGAGTTCCGGGAAGGAATATGGTGCTACTAATCGCGTAGAGAAGGTTTTGAAGCCAGCCGTGCCAGGTCATATGGGAAAAGAAAACAACATAGTACATGTGTCAAATTCTTGTGCCAATGTCAATGGTACACCAGCTTTATCCAATGGGAATTACAACCATAAGCTTGCATCTGTATCACCTGCAGATATCGCATCCCCTACCTCAGATCATGTTGTGGCTTCATCTCAGAACACCAAGCACATGTGCGCTGTGGGTACAATAAAATGTGAGATCGTAAAACGTAGTGGTTCTAATGAATCAAATGCAAGAATTCCAGCTGGCAAGAATTTTACTGCTGATCAGTCAGGTACTGGTACCATTTCCATTATCGCAGAAGCTGCAGATTCTGACCGAAAGTCGATCATAGCTGGAAAGAACCAGATCTCAGATTCTTCGCAGCCTCTTTTGTCGTCAACCCAAAACAGCGGACAGGTTGTCAATTCTATTCAGGATAAGCAGCAGCATCCGCAATCATTAAAAGAGCCTCTAAATGTGACTGTGTTTGATCATATAGATTTGGTTCCCAAAGAAGAGTCTGAGTTGACTATATCAGCTTCGAAACTTGATGTGATGTTGGAGAAGTTGACGTTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATATACAAGTTCCCGAAAAATATAAAAGTCAGTTCGTATTCGGAACTTTGGATGTCACTATCGATGATTGCAAGCCTATTTCCGTTACTGAATCTACTCAGCAAAACGAAGTTGTAAAAGAACCTTCTTTGAGCAACGGAAACGCTTCCGCAATAGCGCAGGAAGGTGAAGTTCAAGATCCTGTTTCTGAAGATGTATCGTGTTTAGAAGATAACATCGCACCTGAATCTTCTGCTCCAACACACGAGCAGACGGTGGAGATAGTACCCCCTCCCCCTTCAACGGGATTTCAGAATATTCCGGTTCTTCAAACCACAAGGGACTACTATGGTTATATGCCACCTCTTATGGGCCCACATTTTGTGCAACTTGATTTACCTGAGCCACAGGCAAGTTTGTTGTCTATTACAGTATTTAATGGGCACTCTCAAGCTGTATCTTCAGTGGGTCAGTCTCCGGTAACACAACCTGCAATTGCTAGCCAGAGTACTTTAGCGTTATCCCCACCGCTGTTTCCTTATTTCAGACCATATCCAAACTACATCCCTTATAACCCGTATTTCCCGCATATGTATTTGCCGCCAAATGCCCCTTTGTTGACCCACGGTGTCTTCCCTCAGCCATCACTGCCACCAACTGCTGTCAATGTCCATCATATGGCGGCAACAGCAGGGCTGACAATACCTACTCCTTCGCAGAACAAACAAGGAAGTAACGAAGATAATACCGCATCTGAAACAAAAGATAACACTATTCTTTCAACGGTTCAACAGGTTGAAGATACACAAGCTCGGGCTCAAGCACCTCTCGATTTACCAAATATACTGCCGAATTATTTCTACGGCTTCCCACATGGACAACACATGGCGGCCTTTTCGCCTTTACAAGCTGCTGCGCTTTATCATTCTTCACAGACCATGACCGCTCAATCTACCATACAACCGCCATTCATGTATCAACCACCACCTACTGGCGGTACGATTGAACACCCTCAACATCAGCATGCACCACAGATAAACCACAACGATACCGCATTAGTGAACACGGGGACTGGTTGA 2163 44.71 MSSGEARVSIPHNARKLIQQVTKTLTHNHTDSFVYSTLIDSAMDPAEATRRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKIINSDVSQENKHTRVNQWRGDKGGRGAFYASKVFEDVGGGRNLSSGKEYGATNRVEKVLKPAVPGHMGKENNIVHVSNSCANVNGTPALSNGNYNHKLASVSPADIASPTSDHVVASSQNTKHMCAVGTIKCEIVKRSGSNESNARIPAGKNFTADQSGTGTISIIAEAADSDRKSIIAGKNQISDSSQPLLSSTQNSGQVVNSIQDKQQHPQSLKEPLNVTVFDHIDLVPKEESELTISASKLDVMLEKLTLSSHQAVIFPDHIQVPEKYKSQFVFGTLDVTIDDCKPISVTESTQQNEVVKEPSLSNGNASAIAQEGEVQDPVSEDVSCLEDNIAPESSAPTHEQTVEIVPPPPSTGFQNIPVLQTTRDYYGYMPPLMGPHFVQLDLPEPQASLLSITVFNGHSQAVSSVGQSPVTQPAIASQSTLALSPPLFPYFRPYPNYIPYNPYFPHMYLPPNAPLLTHGVFPQPSLPPTAVNVHHMAATAGLTIPTPSQNKQGSNEDNTASETKDNTILSTVQQVEDTQARAQAPLDLPNILPNYFYGFPHGQHMAAFSPLQAAALYHSSQTMTAQSTIQPPFMYQPPPTGGTIEHPQHQHAPQINHNDTALVNTGTG 720
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g01140 720 MobiDBLite consensus disorder prediction 682 720 - -
Hetu31g01140 720 MobiDBLite consensus disorder prediction 595 618 - -
Hetu31g01140 720 MobiDBLite consensus disorder prediction 699 720 - -
Hetu31g01140 720 PANTHER FLOCCULATION PROTEIN (DUF1296) 605 710 IPR044277 GO:0051082(PANTHER)
Hetu31g01140 720 MobiDBLite consensus disorder prediction 293 319 - -
Hetu31g01140 720 Pfam GBF-interacting protein 1 N-terminal 10 52 IPR009719 -
Hetu31g01140 720 Pfam GBF-interacting protein 1 N-terminal 53 105 IPR009719 -
Hetu31g01140 720 SUPERFAMILY UBA-like 53 105 IPR009060 GO:0005515(InterPro)
Hetu31g01140 720 MobiDBLite consensus disorder prediction 443 465 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g01140 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299288 Hetu31g01140 Hetu32g01189
300135 Hetu31g01140 Hetu33g01251
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr1:195996844 Hetu31g01140 Hetu-Chr31:53001224 dispersed
Hetu Hetu-Chr31:53001224 Hetu32g01189 Hetu-Chr32:57241056 wgd
Hetu Hetu-Chr31:53001224 Hetu33g01251 Hetu-Chr33:56138577 wgd