AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g01208 ATGAAGATGAACACCAAATACCTAAAACTCTTCATCTTCCTCTTCCTCCTCAACTCCATCACCCTCATCCTCTACTTCTCCTCCCACCCCCACCTCTTCCACCACCGTCCCACCACCCCCACCACCAGCACCCACCACCAATCCACCATCTCCGACCACACCCACCTCTCATCTCCCCCCAATTCCAACAAACCCTGGCCAATCTTACCTTCCTACCTCCCATGGTCCTTAAACCCCAACACCAACTTCAGATCATGCGAATCCTACTTCGGCAACGGTTTCACTCGTCGCATCGATCTTCTAAAACCGGTTCAAACCGGTGGGTGGTTCAGGTGTTTTTATAGTGAGACGCTGAGGAGTTCGGTGTGTGAGGGTGGGGGGTTAAGGATGCATCCGGAGAAGATTAAGATGTCAATGGGTGGTGAGGTTTTGGAGAGTGTGATTGGTAGATCGGAGGATGAGGAGTTGCCGGAGTTTGAAGATGGGGCCTTTGATTTGGTGGGTCAGAAGAGGGGCGTTGAGAGGGTTGCTAGTGAGGGGTTTTTGAATGAGTTTGTTCCGAGAGGGGCGGTTGAGAGGCACACGATGAGGGATTTGATCGGTTCGATGCGGTTTGTTGCGGCGAATGAGTTCCATTGCTCTGAGGTTAGGATTTTTGTTGTGGTTTATGGACTTCCTTTATTGGGCTTTGAGGATTATCAGGATATGATTATGAAGATCTTGTATTGTTCGTGGGTTGAGGAGCCAACGCTTTTGATCACCCGTTTCGAGTATGCAAACCTTTTCCACACTATAACAGACTGGTACAGTGCCTACGTGTCTTCAAGAGTTACCGGCTTGCCAAACAGACCTCAAATAGTTTTTGTAGATGGTCACTGCATGACACAATTGGAAGAAACATGGAAAGCCGTATTCTCGGGTTTGCGATACGCTAAAAACTTCAGCGGGCCTGTTTGCTTTCGCCATGCTATCCTTTCACCTTTGGGCTACGAAACCGCCATGTTCCGTGGTCTATCCGAAACCGTCGATTGTGACGGGGCTTCGGCCCATGATTTATGGCAGAAGCCCGATGACAAAAAAACAGCCCGAATCTCAGAATTCGGGGAGATGATAAGGGCCGCGTTTTCACTTCCGTTACACCAACAACACCACAGCTCAAAATCCGGTTCACGAAATCACAACGTCTTGTTCGTCAGGCGCGAAGATTATCTCGCACATCCCCGCCACGCTGGCAAGGTGCAATCGAGACTCAGTAACGAACAAGAAGTGTTCGATGCTTTAAAAAGCTGGTCAACGGGTCATACCGAATGTAAAATTAATTTAATCAACGGGCTTTTTGCGCATATGTCGATGAAAGAACAGGTGAGAGCGATTCAAGACGCATCGGTTATCGTGGGTGCACATGGGGCGGGACTTACTCACATAGTGTCGGCAACACCGGACACAGAAATACTAGAAATCGTTTCTAGCGAGTATCGAAGGCCTCATTTTGAACTAATTTCGAAATGGAAAGGACTAAATTACCACCCGATATATTTAGGTGGGTCCCACGCTAGCCCCTCGGTAGTTATTGCCAAGCTCAGGGACATTTTGAAGAACATAGGATGCTGA 1611 48.6 MKMNTKYLKLFIFLFLLNSITLILYFSSHPHLFHHRPTTPTTSTHHQSTISDHTHLSSPPNSNKPWPILPSYLPWSLNPNTNFRSCESYFGNGFTRRIDLLKPVQTGGWFRCFYSETLRSSVCEGGGLRMHPEKIKMSMGGEVLESVIGRSEDEELPEFEDGAFDLVGQKRGVERVASEGFLNEFVPRGAVERHTMRDLIGSMRFVAANEFHCSEVRIFVVVYGLPLLGFEDYQDMIMKILYCSWVEEPTLLITRFEYANLFHTITDWYSAYVSSRVTGLPNRPQIVFVDGHCMTQLEETWKAVFSGLRYAKNFSGPVCFRHAILSPLGYETAMFRGLSETVDCDGASAHDLWQKPDDKKTARISEFGEMIRAAFSLPLHQQHHSSKSGSRNHNVLFVRREDYLAHPRHAGKVQSRLSNEQEVFDALKSWSTGHTECKINLINGLFAHMSMKEQVRAIQDASVIVGAHGAGLTHIVSATPDTEILEIVSSEYRRPHFELISKWKGLNYHPIYLGGSHASPSVVIAKLRDILKNIGC 536
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g01208 536 PANTHER PUTATIVE-RELATED 13 536 IPR007657 GO:0016757(InterPro)
Hetu31g01208 536 Pfam Glycosyltransferase 61 382 484 IPR049625 GO:0016757(InterPro)
Hetu31g01208 536 MobiDBLite consensus disorder prediction 37 62 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g01208 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]
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Event-related genes

Select Gene_1 Gene_2 Event_name
111403 Hetu31g01208 Hetu8g01286
299306 Hetu31g01208 Hetu32g01258
300157 Hetu31g01208 Hetu33g01353
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:57339652 Hetu8g01286 Hetu-Chr8:52909466 dispersed
Hetu Hetu-Chr47:179042659 Hetu31g01208 Hetu-Chr31:57339652 transposed
Hetu Hetu-Chr31:57339652 Hetu32g01258 Hetu-Chr32:60809451 wgd
Hetu Hetu-Chr31:57339652 Hetu33g01353 Hetu-Chr33:62856889 wgd
Hetu Hetu-Chr31:57339652 Hetu8g01280 Hetu-Chr8:52741017 wgd