AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g02163 ATGGCTTATCGTAGACGACAGGGACTTTCTAGGTCTTCTACGTTCAATGAAGGTATTCGATGTCTCCCCGAAAAGGATGACGATAAGGCCGCCACCACGTCTTCAGCCGCTCTGCCCCACATATCCTCCGATTCTAGGCTTAACAGCTTTCGCTCCGGCGGTGCCTTTCATTCGTCTTTTAAATACCGATCCAAGGGTTCTGTTACATCTGATTTTGCTTCCGTGAAGAGTTCGAACGAACGAGGGGGATTTTGGGGCGTTTTGGCAAGAAAAGCTAAAGCCATTCTCGAAGATGATATTCCTCAACAACCAAATGCTGCTGGCAGTGTAAAGCAAGAACCGATTAGTTTCTCAACAAGCAACCAGAAGCGTGCTGGCATTCAGATTCAGAATCAAAATAAATCCCTTGAGGATTTAAAGAAAATGGACAGTCCCGCGATAAGGATAGGATCGGACAGGATGACACCCTCACTTAATCAAATTGGTTACACCATTGGCAATTCTCTGGAGATGAGAAAACCAGAATTGAAGAATGAAGAAAAGAATCAGGATCCTAAAGTGCAATCTACTCAACCACAGAAGGACCAAGAAACTCTACTCCAGGCTTCTCGCGATGTGGCGATTGCAACAGCTGCTAAGGTGAAACAACTTTTGCGGGAGCTGAAAACCGTGAAGGCAGAATTAGCATCTGCAAAAGAAAGATGTTGTCGGCTAGAAGAAGAAAATAAATTGCTTCTAGGTGCTCGTGAAAAAGGAGACCACCCTGCAGATGATGACATGATTCGGGTTCAGCTAGAGACACTATTGGCTGAAAAGGGGCGTTTGGCACATGAGAATTCAGCGCATGCACTTGAGAACAGGTACTTGAGGGAAATAGTTGATTTCCACCAGCTAACCATGCAAGATTTGATGTATGCGGATGAAGAGGGCGTTATAGAGGTCATACTACCCGCAACACCAGAAGCCTACCAAAATATGGTGGCAGGCCCATTCTTTGATGCTAGCAGGTATACTGATGATGATGAAGAATAA 1032 45.16 MAYRRRQGLSRSSTFNEGIRCLPEKDDDKAATTSSAALPHISSDSRLNSFRSGGAFHSSFKYRSKGSVTSDFASVKSSNERGGFWGVLARKAKAILEDDIPQQPNAAGSVKQEPISFSTSNQKRAGIQIQNQNKSLEDLKKMDSPAIRIGSDRMTPSLNQIGYTIGNSLEMRKPELKNEEKNQDPKVQSTQPQKDQETLLQASRDVAIATAAKVKQLLRELKTVKAELASAKERCCRLEEENKLLLGAREKGDHPADDDMIRVQLETLLAEKGRLAHENSAHALENRYLREIVDFHQLTMQDLMYADEEGVIEVILPATPEAYQNMVAGPFFDASRYTDDDEE 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g02163 343 Coils Coil 214 234 - -
Hetu31g02163 343 MobiDBLite consensus disorder prediction 176 198 - -
Hetu31g02163 343 MobiDBLite consensus disorder prediction 103 123 - -
Hetu31g02163 343 MobiDBLite consensus disorder prediction 105 123 - -
Hetu31g02163 343 PANTHER UNCHARACTERIZED 1 314 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g02163 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299535 Hetu31g02163 Hetu32g02168
300190 Hetu31g02163 Hetu33g02095
411753 Hetu1g00055 Hetu31g02163
415550 Hetu2g00118 Hetu31g02163
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3364433 Hetu Hetu31g02163 Hetu-Chr31:123533468 Hetu48g01206 Hetu-Chr48:67832082
3531800 Hetu Hetu1g00055 Hetu-Chr1:2777199 Hetu31g02163 Hetu-Chr31:123533468
3580651 Hetu Hetu2g00118 Hetu-Chr2:3792291 Hetu31g02163 Hetu-Chr31:123533468
3580669 Hetu Hetu2g00039 Hetu-Chr2:1358994 Hetu31g02163 Hetu-Chr31:123533468
3614330 Hetu Hetu28g00730 Hetu-Chr28:39420929 Hetu31g02163 Hetu-Chr31:123533468
3618320 Hetu Hetu29g00885 Hetu-Chr29:49280221 Hetu31g02163 Hetu-Chr31:123533468
3623707 Hetu Hetu31g02163 Hetu-Chr31:123533468 Hetu32g02168 Hetu-Chr32:125592104
3625250 Hetu Hetu31g02163 Hetu-Chr31:123533468 Hetu33g02095 Hetu-Chr33:117980245