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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g02189 ATGGAAGCAAATACTACATGGTTTGGTTCAATTTTGCTTTTGTTGTCGGTGTTCGCAATGCTTGCTTCTGCTTCGGCAGATAGTGGTTATGGAAAGTCGCAGCTTGAGGGATATGTGCCACCGAAGACTACTATACCAAAAGAGCATGTGGCCTATGAAAAACCCAATCCTAAGGTACCAACAAAACCGGTGACTCCAAAAGGGGAATATGTATCCTACAAGAAGACTGATCCTAAGTTACCGTCAAAGCCCGTGATACCAACACACGAAAAGCCATTGGTACCCAAGGTGCCAAAGCACCCGAAGAACATTGCAGTGCAAGGTCTTATTTATTGCATAAGTGGTTCCAAACTTATCCCACTTAAAGGAGCGACAACAAAAGTGACTTGTTTGGCCGTGCGTAAGAACGGGTACGGATCGACATCATTTTCATTCTCAAGTTGCCCAGCAGATGAAAAGGGTTACTTCTTAGCCAAGATACGATCATCAAAGGCACTAAAAGACGATGCATGGGAGATAACCGAATGCAAAGCTTTCCTCGAAAAATCACCATGGGCCAATTGCAAGGTTCCCGAAGATACCAACGGAGGACTTACTGGTGCTCGTCTTACATTTTCTCGTCATCTCAACCACGATGGATATTGTTTGTCTTCGGTAGGCCCTTTTATATACAACCCCGGTCATGCATCTTCACCCGGCGAGGGTTACTAG 711 45.15 MEANTTWFGSILLLLSVFAMLASASADSGYGKSQLEGYVPPKTTIPKEHVAYEKPNPKVPTKPVTPKGEYVSYKKTDPKLPSKPVIPTHEKPLVPKVPKHPKNIAVQGLIYCISGSKLIPLKGATTKVTCLAVRKNGYGSTSFSFSSCPADEKGYFLAKIRSSKALKDDAWEITECKAFLEKSPWANCKVPEDTNGGLTGARLTFSRHLNHDGYCLSSVGPFIYNPGHASSPGEGY 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g02189 236 PANTHER OS01G0164075 PROTEIN 12 228 - GO:0071944(PANTHER)
Hetu31g02189 236 Pfam Pollen protein Ole e 1 like 106 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g02189 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299545 Hetu31g02189 Hetu32g02209
411768 Hetu1g00103 Hetu31g02189
415565 Hetu2g00164 Hetu31g02189
416257 Hetu31g02189 Hetu3g00096
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3531813 Hetu Hetu1g00103 Hetu-Chr1:3889601 Hetu31g02189 Hetu-Chr31:125619641
3580664 Hetu Hetu2g00164 Hetu-Chr2:4822684 Hetu31g02189 Hetu-Chr31:125619641
3580681 Hetu Hetu2g00077 Hetu-Chr2:2300999 Hetu31g02189 Hetu-Chr31:125619641
3620040 Hetu Hetu3g00096 Hetu-Chr3:3819724 Hetu31g02189 Hetu-Chr31:125619641
3623723 Hetu Hetu31g02189 Hetu-Chr31:125619641 Hetu32g02209 Hetu-Chr32:127693635
3626436 Hetu Hetu31g02189 Hetu-Chr31:125619641 Hetu33g02161 Hetu-Chr33:120606551