AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu31g02268 ATGGTTGCACCTGTGGCGGATCGAACGCCGGCAATGATGATTCCGGCAACGGCGGTACAGCCGGCGGCGGTGATGCCGGAGGCGTACGCGAAGGACGCGATAATCTCGTGGTTTCGTGGCGAGTTCGCGGCGGCGAACGCGATAATCGATGCGTTGTGTGGACATTTGTCGCAGTTAGAAGGCGGAAGGTGTGAATATGAGGCGGTGTTTGCGGCGATTCATCGGCGCCGGTTGAATTGGATCCCGATTCTTCAGATGCAGAAGTTTTTTTCGATTGCGGATGTGACGGTGGAGCTGGAGAAGGTAGCGGAGAAGGTGAAGGTGAAGGTTCCGGTGGTGGAGATGAAGCGTGAGATTGTGGTGGAGGAACCGGTGGAAATTATGGATGTTAATGGTGGTGTTGAGGTGGTTGATGACGATTTGTTCAAGGATTATTCGCCGAAAAGCGGGATTACAGATGCAGATTTCAGATCTCTATCCTCTTTGTATCACTTTGAACCACCAGGATCTCAAGAAGTGCATTCGGCAGCAGAAAGCATTGAAGCATGCTCAAACCAAGAAGATTGGGAAGCGCGCCGGGCTGAAATGAAGCTAACGAAAGGGTTTGCGGCCAAGGAGTCCGTAAAAGGACATATGGTGAATGTGGTGAGAGGGTTGAAGTTGTACGAGGACATACTTAACGCGACAGAGCTATCTAAGTTGACCGACTATGTAACTGAACTCAGAATTGCTGGCCAAAATGGTGAACTTTCAGGTGAGACTTTTATCATGTACAACCAGCAGTCAAAGGCAATAAAGAGAGAACTTATTCAGTTTGGAGCTCCTATTTTTGGACAGATTAAAGATGATCAAGCTAGCAATATCGACCCGATTCCTGCTCCTCTTGAAGGTATCATTGACCATCTAATTCAGCTTCACTTAATTTCTGAAAACAGAAGACCCAACAGCTGCATCATAAACTTTTTTGATGAGGGAGAATTTTCACAGCCTTTCTTGAAACCACCACATCTAGAGCAACCTATCTCAACAATTGTTTTATCCGAATCTACAATGGCTTTTGGGCGTAGTCTAGTCTGTGATAATGAAGGCAACTATAAAGGACCCCTCATGCTTTCTCTTAAGGAAGGGTCACTCTTAGTGATGAGGGGAAACAGTGCTGACATGGCACGCCATGCCATGTCCCAGTCTCAGACTAAGCGAATCAGCATTACATTTTTCAAAGTCCGAATAGACAAAAACCCACCCTCAAAAGATCCCATGGCCGGAGCCATGACCGTATGGCAGCCAAGCCTTCCAACGGGTGATTTGGTCCACGTTCTTCCCAAATGGGGTGCCATTCGAGCCCCACAACTTCTTATGTTAGCACCGGTCCCTCCCATGGTTATGAGCCCAAGAAGGCTACCACGTGGCGGGACTGGTGTTTTCTTACCATGGAACAACGGGTCAAAAAAACAAACTAAACATCTACCTCCCCGTGCTCAAAGGGGGCGTCTTCTAGCATTGTCTGCCCCCACTGAACCACACAAAATAAACAAAACCCCTGATTCTGTCATTAGCGTTGCTTGA 1566 47.96 MVAPVADRTPAMMIPATAVQPAAVMPEAYAKDAIISWFRGEFAAANAIIDALCGHLSQLEGGRCEYEAVFAAIHRRRLNWIPILQMQKFFSIADVTVELEKVAEKVKVKVPVVEMKREIVVEEPVEIMDVNGGVEVVDDDLFKDYSPKSGITDADFRSLSSLYHFEPPGSQEVHSAAESIEACSNQEDWEARRAEMKLTKGFAAKESVKGHMVNVVRGLKLYEDILNATELSKLTDYVTELRIAGQNGELSGETFIMYNQQSKAIKRELIQFGAPIFGQIKDDQASNIDPIPAPLEGIIDHLIQLHLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTIVLSESTMAFGRSLVCDNEGNYKGPLMLSLKEGSLLVMRGNSADMARHAMSQSQTKRISITFFKVRIDKNPPSKDPMAGAMTVWQPSLPTGDLVHVLPKWGAIRAPQLLMLAPVPPMVMSPRRLPRGGTGVFLPWNNGSKKQTKHLPPRAQRGRLLALSAPTEPHKINKTPDSVISVA 521
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu31g02268 521 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 28 505 IPR044842 GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro)
Hetu31g02268 521 SUPERFAMILY Clavaminate synthase-like 210 405 - -
Hetu31g02268 521 Gene3D - 202 413 IPR037151 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu31g02268 K10767 mRNA N6-methyladenine demethylase [EC:1.14.11.53]
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Event-related genes

Select Gene_1 Gene_2 Event_name
299575 Hetu31g02268 Hetu32g02296
300221 Hetu31g02268 Hetu33g02221
411793 Hetu1g00221 Hetu31g02268
416264 Hetu31g02268 Hetu3g00212
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:132314350 Hetu48g02773 Hetu-Chr48:165066202 dispersed
Hetu Hetu-Chr1:8596205 Hetu31g02268 Hetu-Chr31:132314350 wgd
Hetu Hetu-Chr3:8843562 Hetu31g02268 Hetu-Chr31:132314350 wgd
Hetu Hetu-Chr31:132314350 Hetu32g02296 Hetu-Chr32:134362201 wgd
Hetu Hetu-Chr31:132314350 Hetu33g02221 Hetu-Chr33:126231528 wgd