Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu31g02268 | ATGGTTGCACCTGTGGCGGATCGAACGCCGGCAATGATGATTCCGGCAACGGCGGTACAGCCGGCGGCGGTGATGCCGGAGGCGTACGCGAAGGACGCGATAATCTCGTGGTTTCGTGGCGAGTTCGCGGCGGCGAACGCGATAATCGATGCGTTGTGTGGACATTTGTCGCAGTTAGAAGGCGGAAGGTGTGAATATGAGGCGGTGTTTGCGGCGATTCATCGGCGCCGGTTGAATTGGATCCCGATTCTTCAGATGCAGAAGTTTTTTTCGATTGCGGATGTGACGGTGGAGCTGGAGAAGGTAGCGGAGAAGGTGAAGGTGAAGGTTCCGGTGGTGGAGATGAAGCGTGAGATTGTGGTGGAGGAACCGGTGGAAATTATGGATGTTAATGGTGGTGTTGAGGTGGTTGATGACGATTTGTTCAAGGATTATTCGCCGAAAAGCGGGATTACAGATGCAGATTTCAGATCTCTATCCTCTTTGTATCACTTTGAACCACCAGGATCTCAAGAAGTGCATTCGGCAGCAGAAAGCATTGAAGCATGCTCAAACCAAGAAGATTGGGAAGCGCGCCGGGCTGAAATGAAGCTAACGAAAGGGTTTGCGGCCAAGGAGTCCGTAAAAGGACATATGGTGAATGTGGTGAGAGGGTTGAAGTTGTACGAGGACATACTTAACGCGACAGAGCTATCTAAGTTGACCGACTATGTAACTGAACTCAGAATTGCTGGCCAAAATGGTGAACTTTCAGGTGAGACTTTTATCATGTACAACCAGCAGTCAAAGGCAATAAAGAGAGAACTTATTCAGTTTGGAGCTCCTATTTTTGGACAGATTAAAGATGATCAAGCTAGCAATATCGACCCGATTCCTGCTCCTCTTGAAGGTATCATTGACCATCTAATTCAGCTTCACTTAATTTCTGAAAACAGAAGACCCAACAGCTGCATCATAAACTTTTTTGATGAGGGAGAATTTTCACAGCCTTTCTTGAAACCACCACATCTAGAGCAACCTATCTCAACAATTGTTTTATCCGAATCTACAATGGCTTTTGGGCGTAGTCTAGTCTGTGATAATGAAGGCAACTATAAAGGACCCCTCATGCTTTCTCTTAAGGAAGGGTCACTCTTAGTGATGAGGGGAAACAGTGCTGACATGGCACGCCATGCCATGTCCCAGTCTCAGACTAAGCGAATCAGCATTACATTTTTCAAAGTCCGAATAGACAAAAACCCACCCTCAAAAGATCCCATGGCCGGAGCCATGACCGTATGGCAGCCAAGCCTTCCAACGGGTGATTTGGTCCACGTTCTTCCCAAATGGGGTGCCATTCGAGCCCCACAACTTCTTATGTTAGCACCGGTCCCTCCCATGGTTATGAGCCCAAGAAGGCTACCACGTGGCGGGACTGGTGTTTTCTTACCATGGAACAACGGGTCAAAAAAACAAACTAAACATCTACCTCCCCGTGCTCAAAGGGGGCGTCTTCTAGCATTGTCTGCCCCCACTGAACCACACAAAATAAACAAAACCCCTGATTCTGTCATTAGCGTTGCTTGA | 1566 | 47.96 | MVAPVADRTPAMMIPATAVQPAAVMPEAYAKDAIISWFRGEFAAANAIIDALCGHLSQLEGGRCEYEAVFAAIHRRRLNWIPILQMQKFFSIADVTVELEKVAEKVKVKVPVVEMKREIVVEEPVEIMDVNGGVEVVDDDLFKDYSPKSGITDADFRSLSSLYHFEPPGSQEVHSAAESIEACSNQEDWEARRAEMKLTKGFAAKESVKGHMVNVVRGLKLYEDILNATELSKLTDYVTELRIAGQNGELSGETFIMYNQQSKAIKRELIQFGAPIFGQIKDDQASNIDPIPAPLEGIIDHLIQLHLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTIVLSESTMAFGRSLVCDNEGNYKGPLMLSLKEGSLLVMRGNSADMARHAMSQSQTKRISITFFKVRIDKNPPSKDPMAGAMTVWQPSLPTGDLVHVLPKWGAIRAPQLLMLAPVPPMVMSPRRLPRGGTGVFLPWNNGSKKQTKHLPPRAQRGRLLALSAPTEPHKINKTPDSVISVA | 521 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu31g02268 | 521 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED | 28 | 505 | IPR044842 | GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro) | |
| Hetu31g02268 | 521 | SUPERFAMILY | Clavaminate synthase-like | 210 | 405 | - | - | |
| Hetu31g02268 | 521 | Gene3D | - | 202 | 413 | IPR037151 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu31g02268 | K10767 | mRNA N6-methyladenine demethylase [EC:1.14.11.53] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 299575 | Hetu31g02268 | Hetu32g02296 | |
| 300221 | Hetu31g02268 | Hetu33g02221 | |
| 411793 | Hetu1g00221 | Hetu31g02268 | |
| 416264 | Hetu31g02268 | Hetu3g00212 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr31:132314350 | Hetu48g02773 | Hetu-Chr48:165066202 | dispersed | |
| Hetu | Hetu-Chr1:8596205 | Hetu31g02268 | Hetu-Chr31:132314350 | wgd | |
| Hetu | Hetu-Chr3:8843562 | Hetu31g02268 | Hetu-Chr31:132314350 | wgd | |
| Hetu | Hetu-Chr31:132314350 | Hetu32g02296 | Hetu-Chr32:134362201 | wgd | |
| Hetu | Hetu-Chr31:132314350 | Hetu33g02221 | Hetu-Chr33:126231528 | wgd |