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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00677 ATGTCACACTCCAAACTCAACCTTAACCTCCCCTCTACACAGATTTCTCTTATAATCTCTTCACTTCAATTCCTCTCTCAAACTCCACCAATCTTCTCCGGCTATCCTCTTAGAAGGAGGATGACGTCAGGAACGAGGATGCCGACGTGGAAGGAGCGAGAGAACAACAAGAGGAGAGAGAGGAGGAGGAGAGCCATCGCTGCGAAGATATTCACCGGTTTGAGGATGTACGGTAACTACAAACTGCCGAAACATTGTGATAATAATGAAGTACTCAAAGCACTCGCTGATGAGGCCGGTTGGACCGTTGAACCGGACGGCACTACTTATCGTAAGGGATGCAAGCCTATGGAGCGGATGGAAATTGGTGGATCTGCATCAGTAAGCCCATGCTCATCTTACCAGCCCAGCCCATATGCTTCCTATCACCCAAGCCCACCGTCATCTTCAATTGCAAGCCCATCCTCATCCTCTTACGTACCCAACACCCACCCAGATTCACTCATCCCATGGCTCAAGAACCTTTCTTCTTCATCCTCATCATCGCACTCTGCCAAACTTCCTCATCTTTACATCCACACCGGGTCCATTAGCGCGCCCGTGACCCCACCCATGAGCTCCCCAACGGCTCGATCACCTACCCGAATCAAAACCAACACTCTTTGGGGAGCACCCGCTTCCGAATGGTTCACTGGCATTCGTCCCACGTCTCCAACTTTCAGCCTTGTGGCAGCGAACCCGTTTGGGTTCAAGAATACGGGCTTGTCTCATGGTGGCTCACGCATGTGGACACCTGGTCAAAGTGGGACGTGTTCTCCTGCAATTCCTGCGGGCTTTGATAACAACGCGGATATTCCAATGGCAGAAGTGGTTACCGATGACTTTGCATTCGGTAAAGTGAAGCCTTGGGAAGGAGAAAGGATTCACGAGGTTTGCGGGTCTGATGATCTTGAGCTTACTCTTGGAAATTCAAAAACTAGGTAA 984 50.3 MSHSKLNLNLPSTQISLIISSLQFLSQTPPIFSGYPLRRRMTSGTRMPTWKERENNKRRERRRRAIAAKIFTGLRMYGNYKLPKHCDNNEVLKALADEAGWTVEPDGTTYRKGCKPMERMEIGGSASVSPCSSYQPSPYASYHPSPPSSSIASPSSSSYVPNTHPDSLIPWLKNLSSSSSSSHSAKLPHLYIHTGSISAPVTPPMSSPTARSPTRIKTNTLWGAPASEWFTGIRPTSPTFSLVAANPFGFKNTGLSHGGSRMWTPGQSGTCSPAIPAGFDNNADIPMAEVVTDDFAFGKVKPWEGERIHEVCGSDDLELTLGNSKTR 327
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00677 327 PANTHER BES1-BZR1 HOMOLOG PROTEIN 3-RELATED 41 327 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Hetu32g00677 327 Pfam BES1-BZR1 plant transcription factor, N-terminal 44 176 IPR008540 -
Hetu32g00677 327 MobiDBLite consensus disorder prediction 136 159 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00677 K14503 brassinosteroid resistant 1/2
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr10:121361395 Hetu32g00677 Hetu-Chr32:29128571 dispersed
Hetu Hetu-Chr12:118517230 Hetu32g00677 Hetu-Chr32:29128571 dispersed
Hetu Hetu-Chr18:138899575 Hetu32g00677 Hetu-Chr32:29128571 dispersed
Hetu Hetu-Chr31:25835407 Hetu32g00677 Hetu-Chr32:29128571 dispersed
Hetu Hetu-Chr32:29128571 Hetu33g00778 Hetu-Chr33:30221708 dispersed
Hetu Hetu-Chr32:29057375 Hetu32g00677 Hetu-Chr32:29128571 proximal
Hetu Hetu-Chr32:29060304 Hetu32g00677 Hetu-Chr32:29128571 proximal
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hetu7g01701 . 3 325 BZR Transcription Factor family AT1G78700 65.123 8.58e-108 315.0
Hetu8g01546 . 3 325 BZR Transcription Factor family AT1G78700 65.741 1.36e-108 318.0
Hetu10g01295 . 3 325 BZR Transcription Factor family AT1G78700 69.325 3.92e-121 350.0
Hetu10g02265 . 1 325 BZR Transcription Factor family AT1G78700 60.486 1.58e-96 286.0
Hetu11g01240 . 3 217 BZR Transcription Factor family AT1G78700 66.055 6.44e-67 207.0
Hetu12g01154 . 3 325 BZR Transcription Factor family AT1G78700 68.098 1.45e-117 340.0
Hetu12g02182 . 1 325 BZR Transcription Factor family AT1G78700 60.736 4.23e-98 290.0
Hetu17g02420 . 283 325 BZR Transcription Factor family AT1G78700 68.182 2.32e-13 61.2
Hetu18g02763 . 283 325 BZR Transcription Factor family AT1G78700 68.182 2.32e-13 61.2
Hetu19g01282 HSH 14 82 BZR Transcription Factor family AT3G50750 75.362 1.78e-22 85.9
Hetu20g01413 HSH 4 72 BZR Transcription Factor family AT4G18890 78.261 1.06e-21 84.0
Hetu21g01397 HSH 6 82 BZR Transcription Factor family AT3G50750 74.026 1.31e-23 89.0
Hetu21g01399 HSH 6 82 BZR Transcription Factor family AT3G50750 74.026 1.31e-23 89.0
Hetu22g02363 ACH,HSH 22 335 BZR Transcription Factor family AT1G75080 51.104 4.37e-78 238.0
Hetu24g02623 ACH,HSH 22 335 BZR Transcription Factor family AT1G75080 50.473 1.39e-76 234.0
Hetu25g00614 . 22 335 BZR Transcription Factor family AT1G75080 62.461 1.50e-99 294.0
Hetu26g00574 . 22 335 BZR Transcription Factor family AT1G75080 62.461 7.54e-100 295.0
Hetu27g00705 . 22 335 BZR Transcription Factor family AT1G75080 61.83 5.61e-98 290.0
Hetu31g00639 . 1 325 BZR Transcription Factor family AT1G78700 66.768 1.11e-111 325.0
Hetu32g00674 HSH 78 325 BZR Transcription Factor family AT1G78700 58.167 5.39e-67 207.0
Hetu32g00675 . 1 72 BZR Transcription Factor family AT1G78700 91.667 7.23e-29 104.0
Hetu32g00677 . 1 325 BZR Transcription Factor family AT1G78700 66.768 1.11e-111 325.0
Hetu33g00771 . 259 325 BZR Transcription Factor family AT1G78700 50.746 7.40e-15 65.9
Hetu33g00776 HSH 172 325 BZR Transcription Factor family AT1G78700 55.484 8.60e-41 136.0
Hetu33g00778 . 65 325 BZR Transcription Factor family AT1G78700 57.576 3.70e-70 222.0
Hetu37g01060 . 22 330 BZR Transcription Factor family AT1G75080 51.592 6.05e-70 218.0
Hetu38g00934 . 258 330 BZR Transcription Factor family AT1G75080 38.356 2.89e-08 48.9
Hetu39g00550 ACH 209 334 BZR Transcription Factor family AT1G75080 41.27 1.15e-18 79.0
Hetu40g01638 . 23 334 BZR Transcription Factor family AT1G75080 63.462 3.67e-110 321.0
Hetu41g01808 . 23 334 BZR Transcription Factor family AT1G75080 63.462 2.62e-110 322.0
Hetu42g01065 . 23 334 BZR Transcription Factor family AT1G75080 62.821 2.29e-108 318.0
Hetu43g02078 . 1 325 BZR Transcription Factor family AT1G78700 67.073 3.07e-115 333.0
Hetu44g02068 . 1 325 BZR Transcription Factor family AT1G78700 66.768 1.29e-114 333.0
Hetu45g02007 . 1 325 BZR Transcription Factor family AT1G78700 64.058 9.03e-112 325.0
Hetu46g00698 . 21 334 BZR Transcription Factor family AT1G19350 61.392 1.19e-94 281.0
Hetu46g01544 . 35 82 BZR Transcription Factor family AT4G36780 64.583 6.07e-16 69.7
Hetu47g00676 . 21 334 BZR Transcription Factor family AT1G19350 60.759 7.23e-94 280.0
Hetu47g00760 . 21 334 BZR Transcription Factor family AT1G19350 60.759 7.23e-94 280.0
Hetu47g01432 . 7 82 BZR Transcription Factor family AT3G50750 53.947 1.77e-15 68.6
Hetu48g00659 . 22 335 BZR Transcription Factor family AT1G75080 62.025 4.04e-93 278.0
Hetu49g01384 . 1 321 BZR Transcription Factor family AT1G78700 66.049 1.92e-115 335.0
Hetu50g01203 . 1 321 BZR Transcription Factor family AT1G78700 66.049 3.39e-115 335.0
Hetu51g01487 . 1 325 BZR Transcription Factor family AT1G78700 65.854 3.09e-116 336.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Hetu BES1_N 1.1e-62 No_clan TF BES1