AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu32g00743 | ATGGCGACTCGTGTTCTTCTTCGCACCCTCATTTCCTCCGTCAATCAAACCCTAATCCCCCGTTCCTTCATCAATCCTTCTCAACTCCTCCGATTCCGTCCAGTTTTCGCCATCGCCGCCGCTAATCTCCACCACTCTGTTGCGGCAACAAATGTCCGTACGTTCTCCACACGCCCTACCACGTCTTCTCTAAACGATTCGAGCCCTAACTGGTCTAATCGCCCCCCTAAGGAGACGATTCTTCTTGACGGTTGTGATTTTGAGCACTGGCTTGTTGTTGTTGAGAAACCGGAGGGTGAGCCTACGAGAGATGAGATTATTGAGTCGTATATTAATACCTTAGCTAAGGTTGTTGGCAGTTATGATGAGGCAAGGATGAAAATATACTCGGTTTCGACAAGATGCTATTATGCTTTTGGTGCCCTTGTATCTGAAGAACTGTCTTACAAGCTCAAGGAATTACCCGGAGTTCGTTGGGTGCTACCTGATTCTTATTTGGATGTTAAGAACAAAGATTACGGAGGTGAACCGTTTATTGATGGGAAGGCTGTTCCTTATGATCCGAAGTACCATGAGGAGTGGATCCGAAATAACGCTCGGGCCAATGAGAGAAACAGGAGGAATGACAGGCCTCGCAACTTTGACCGGTCAAGAAATTTTGAAAGGAGAAGAGAGAACATGCAAAGCAACCGTGGACCTCCCAACAACATGAGCGGGCCACCGAACAACAACTTTAACGGCCCACCGCCCAACAACATGAGCGGGCCACCGCCCAACAACATGAGCGGGCCACCACCGCCCAACAACATGAGCGGTCAACCCAATAATTGGAATGGCCCACCCCCACCAAACAACATGAGTGGACAACCCAACAATATGAGAGGTCAACCTAATAACTGGAATGGCCCACCACCACCCTACAACGGAGGGCCTAACTATCAGCAGCAGGGGCGATATGGACCAAACAATGGAGGGACGGGGTATCAATCAGGGCCCGGCCCCAACAGTTATGGGCCGAAGGCAGGACAGACACAGGATTTACCTGGAAGAGATATGCCCCCTGCAGCCAACTATGAATGA | 1080 | 50.09 | MATRVLLRTLISSVNQTLIPRSFINPSQLLRFRPVFAIAAANLHHSVAATNVRTFSTRPTTSSLNDSSPNWSNRPPKETILLDGCDFEHWLVVVEKPEGEPTRDEIIESYINTLAKVVGSYDEARMKIYSVSTRCYYAFGALVSEELSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQSNRGPPNNMSGPPNNNFNGPPPNNMSGPPPNNMSGPPPPNNMSGQPNNWNGPPPPNNMSGQPNNMRGQPNNWNGPPPPYNGGPNYQQQGRYGPNNGGTGYQSGPGPNSYGPKAGQTQDLPGRDMPPAANYE | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu32g00743 | 359 | MobiDBLite | consensus disorder prediction | 202 | 228 | - | - | |
| Hetu32g00743 | 359 | MobiDBLite | consensus disorder prediction | 202 | 359 | - | - | |
| Hetu32g00743 | 359 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 87 | 178 | IPR054059 | - | |
| Hetu32g00743 | 359 | MobiDBLite | consensus disorder prediction | 243 | 287 | - | - | |
| Hetu32g00743 | 359 | MobiDBLite | consensus disorder prediction | 311 | 342 | - | - | |
| Hetu32g00743 | 359 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 23 | 231 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu32g00743 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 110708 | Hetu28g02597 | Hetu32g00743 | |
| 110947 | Hetu29g02639 | Hetu32g00743 | |
| 111282 | Hetu30g02642 | Hetu32g00743 | |
| 299160 | Hetu31g00687 | Hetu32g00743 | |
| 300990 | Hetu32g00743 | Hetu33g00804 | |
| 409901 | Hetu16g02581 | Hetu32g00743 | |
| 410544 | Hetu17g02435 | Hetu32g00743 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr10:176599678 | Hetu32g00743 | Hetu-Chr32:31953817 | dispersed | |
| Hetu | Hetu-Chr11:178396657 | Hetu32g00743 | Hetu-Chr32:31953817 | dispersed | |
| Hetu | Hetu-Chr12:171138942 | Hetu32g00743 | Hetu-Chr32:31953817 | dispersed | |
| Hetu | Hetu-Chr17:129620272 | Hetu32g00743 | Hetu-Chr32:31953817 | dispersed | |
| Hetu | Hetu-Chr18:137487069 | Hetu32g00743 | Hetu-Chr32:31953817 | dispersed | |
| Hetu | Hetu-Chr32:31953817 | Hetu49g01616 | Hetu-Chr49:71501833 | dispersed | |
| Hetu | Hetu-Chr16:136565424 | Hetu32g00743 | Hetu-Chr32:31953817 | wgd | |
| Hetu | Hetu-Chr28:175145683 | Hetu32g00743 | Hetu-Chr32:31953817 | wgd | |
| Hetu | Hetu-Chr29:165130463 | Hetu32g00743 | Hetu-Chr32:31953817 | wgd | |
| Hetu | Hetu-Chr30:164795501 | Hetu32g00743 | Hetu-Chr32:31953817 | wgd | |
| Hetu | Hetu-Chr31:28790308 | Hetu32g00743 | Hetu-Chr32:31953817 | wgd | |
| Hetu | Hetu-Chr32:31953817 | Hetu33g00804 | Hetu-Chr33:31713680 | wgd |