AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00812 ATGGCAATCAAAAGAAGTTTGTTTCTTGTCACTTTGGCAACAATTGCTATTTCTGGTGCACTCACACAAGTCAAAGCTTATTCAAGCTCGTACTGTGGCATAGGGTCCCGTTGCGAACACCAAACCCTTTATTGCCCTTCGGAGTGCCCCTCTAGCGAGTCCAATGACCCTGACGCTAAAGTTTGCCGCATCGACTGCTATTCTCCAAAATGCAAAGCCGAATGCAAACATCGCAAACCAAACTGTAACAGCCCGGGATCAGCATGCTACGACCCACGATTCATCGGTGGAGATGGCATTGTCTTCTACTTTCACGGCAAGGTCAACGAGCATTTCGCCTTGATCTCCGACTCCAACCTCCAAATCAACGGCCGATTCATCGGCCACAGGCCCGCGGGCCGATCCAGGGACTTCACCTGGATCCAATCTCTTGGGCTCCTCTTCAACTCCCATACTTTCTCTCTAGAAGCAACCAAATCCGCCACATGGGACGGCGAAATCGACCACCTCAAATTCGCATACGACGGAGAAGAGATCTCTCTACCCGTCGGCGGGCTTTCCACGTGGAAGTCACGTGAGGAAGAAATAAAAGTGGAGAGAACTTCCGGTTTGAACAGTGTGATGGTAACTATTCCTGGAGTTGTGGAGATTTTGGCAAATGTGGTTCCTGTGACCGCTGAAGACGACCGAATTCACGGTTACAATGTTCCTTCCGATGATTGCTTTGCTCATTTGGAGGTTCAGTTCAGGTTTGCTGGACTTTCTGACGGCGTTGAAGGCGTGTTGGGGAGGACGTATCAGCCAGATTTCAAGAACCCGGCGAAACCTGGGGTGGCAATGGCGGTTGTGGGAGGCGAAGACAAGTATAAAACTAGCTCGTTGTTGGCTGCGGATTGCGCGAACTGCGTGTTTGATTCGAGTAATGTTGTAGGGAATGAGAAGCAGATGGTTACGTTGGATTGTTCTGCTAAAGGGTTGTTCCATGGAAATGGGATTGTTTGCAAGAAATGA 1011 49.65 MAIKRSLFLVTLATIAISGALTQVKAYSSSYCGIGSRCEHQTLYCPSECPSSESNDPDAKVCRIDCYSPKCKAECKHRKPNCNSPGSACYDPRFIGGDGIVFYFHGKVNEHFALISDSNLQINGRFIGHRPAGRSRDFTWIQSLGLLFNSHTFSLEATKSATWDGEIDHLKFAYDGEEISLPVGGLSTWKSREEEIKVERTSGLNSVMVTIPGVVEILANVVPVTAEDDRIHGYNVPSDDCFAHLEVQFRFAGLSDGVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYKTSSLLAADCANCVFDSSNVVGNEKQMVTLDCSAKGLFHGNGIVCKK 336
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00812 336 Pfam Root cap 248 304 IPR009646 -
Hetu32g00812 336 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 28 336 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00812 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:32464231 Hetu32g00812 Hetu-Chr32:35610563 dispersed
Hetu Hetu-Chr31:32505436 Hetu32g00812 Hetu-Chr32:35610563 dispersed
Hetu Hetu-Chr32:35610563 Hetu33g00875 Hetu-Chr33:35765435 dispersed
Hetu Hetu-Chr32:35553854 Hetu32g00812 Hetu-Chr32:35610563 tandem