AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00818 ATGCAACCATCAAAAACCCTACCGGAATCCGACCTACCACCAATCGCCGCCATCAAAATCAAATCCTCCTCCCCACGCATCCGCCCAGCCATCACCCCACCCCCCACCGAAACCCCAACCACCGCTGCCCAACGCCGCATCGGCATCGCCGTCGACCTCTCCGACGAGAGCGCCTTCGCCGTCAAATGGGCCGTTAACCAGTACCTCCGCCCGGGAGACGCTGTCATCCTCATCCACGTCCGCCCTACCTCCGTCCTCTACGGCGCTGATTGGGGCTCCGTTGACTTCGTTGACCCCGAAAACGAAGAGTCAAAATCAAAACTCGAAGACGATTTCGACACTTTCACAACTACTAAATCTGCTGACCTAGCGCAGCCTCTGGTGGACGCGCACATACCGTATAAGATCCATATTGTGAAAGATCATGATATGAAGGAGAGGCTGTGTTTGGAAGTTGAGAGGTTAGGGTTAAGTGCGGTTATTATGGGGAGTAGAGGGTTTGGTGCGGTGAAAAGGGGGAGTGATGGGAGGTTAGGGAGTGTTAGTGATTATTGTGTCAGGCATTGTGTGTGTCCTGTTGTGGTTGTCAGGTATGATGAGAAGGAGGCAGCGGTTTCGGGTGATCCGGTTGTTGTTTCCGCTTCTGCGGGTGTGGATGAGGAGGATGGGGATGAATTTCATGATGCTGTTGAGGAGCGGAAATGGTAG 708 53.95 MQPSKTLPESDLPPIAAIKIKSSSPRIRPAITPPPTETPTTAAQRRIGIAVDLSDESAFAVKWAVNQYLRPGDAVILIHVRPTSVLYGADWGSVDFVDPENEESKSKLEDDFDTFTTTKSADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVKRGSDGRLGSVSDYCVRHCVCPVVVVRYDEKEAAVSGDPVVVSASAGVDEEDGDEFHDAVEERKW 235
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00818 235 PANTHER OS01G0783500 PROTEIN 8 234 IPR044162 -
Hetu32g00818 235 CDD USP-Like 46 196 - -
Hetu32g00818 235 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 201 - -
Hetu32g00818 235 Pfam Universal stress protein family 45 197 IPR006016 -
Hetu32g00818 235 Gene3D HUPs 35 208 IPR014729 -
Hetu32g00818 235 PRINTS Universal stress protein signature 175 197 IPR006015 -
Hetu32g00818 235 PRINTS Universal stress protein signature 44 62 IPR006015 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00818 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299194 Hetu31g00768 Hetu32g00818
301024 Hetu32g00818 Hetu33g00886
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr31:32892177 Hetu32g00818 Hetu-Chr32:35915810 dispersed
Hetu Hetu-Chr32:35915810 Hetu33g00886 Hetu-Chr33:36085811 dispersed
Hetu Hetu-Chr32:35900872 Hetu32g00818 Hetu-Chr32:35915810 tandem