AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00926 ATGGTTGAAGATGAAAATATGGAGGATATATTTGTAGCAATCCTTTCAATGCTTCTTCTTGTTGCGTTGATTCCACTTTACCTATGGAAACGCCGTCAGGTTCCGCAGTCACGTGACGAACACGATGAACAACCACAGATTCAGCAGAGAGAAGCTGTTGTAAGACCTACTGGTGCTCGAAGTCGGATGCGCAGACGGCATACGTCTGAAGCTAGCTCATCTCCTGCTCCACAAACTGTAGAAGAAACCGAGGATGGAAGTGATGAAGAAGCGGTTGAAGGGGAATATTATAATGCGAAAGCGTCGAAGAAGAAAGGAAGGAAGAAAGAGGAACGACAAGCGCAACGCCAGGCTGAGGAGGCTGCAAGGGAGTCGAGAAATACGAAACAAGATCGTTATGCCGAAATGCGCAGGAGGAAAGATGAGGAACATGAAGCAAGGGAACGGATGCTGGAAGAAGAAGCTGCGGCTCGAAAGGCCAAAGAAGAGGAAGCAGCAGCTTTAGAGTTTGAGAAATGGAAAGGGGAGTTTTCAGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACCCAGGGTTTACTTTTTGATTTTGTTGAGTACATTAAGAAACAGAAATGTGTTCCATTGGAAGATCTTGCTGCAGAATTTAAACTAAGGACTCAGGACTGTATCAATCGAATCACCTCATTGGAAGATATGGGGAGATTGTCGGGTGTAATGGACGATAGAGGAAAGTACATATACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAGCGCGAAGGTCGTGTTAGCATTGCACATCTAGCAAGCCAGTCAAATCAGTTCATAGATTTGGAACCCAAATCACAGCTTGTCGAGGATTTAGGCATTGCAGATGAGATTACAGTTGCTTGA 915 44.48 MVEDENMEDIFVAILSMLLLVALIPLYLWKRRQVPQSRDEHDEQPQIQQREAVVRPTGARSRMRRRHTSEASSSPAPQTVEETEDGSDEEAVEGEYYNAKASKKKGRKKEERQAQRQAEEAARESRNTKQDRYAEMRRRKDEEHEARERMLEEEAAARKAKEEEAAALEFEKWKGEFSVDAEGTTENEVQDGTQGLLFDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKSQLVEDLGIADEITVA 304
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00926 304 MobiDBLite consensus disorder prediction 111 154 - -
Hetu32g00926 304 FunFam DDRGK domain-containing protein 1 195 252 - -
Hetu32g00926 304 Gene3D - 195 252 IPR036388 -
Hetu32g00926 304 MobiDBLite consensus disorder prediction 37 154 - -
Hetu32g00926 304 SUPERFAMILY Winged helix DNA-binding domain 191 260 IPR036390 -
Hetu32g00926 304 Coils Coil 104 131 - -
Hetu32g00926 304 Coils Coil 133 171 - -
Hetu32g00926 304 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 88 291 IPR050899 -
Hetu32g00926 304 Pfam DDRGK domain 99 284 IPR019153 -
Hetu32g00926 304 SMART DDRGK-2 99 284 IPR019153 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00926 K23344 DDRGK domain-containing protein 1
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Event-related genes

Select Gene_1 Gene_2 Event_name
301046 Hetu32g00926 Hetu33g00990
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr32:43826882 Hetu33g00990 Hetu-Chr33:42661134 wgd