AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu32g00956 ATGGCACCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCCAAAACCCACTTCACAATCACCCTCCTCATACTCCTCACTTGTATCCTCAATCCCAACGTACAAGCCCTCAAAGCACCAATTCATCCACAAGACATACTCCCACTTTTACCCCATCAAATTTCATGGCCCCTTCTCAACTCTCTCCGGGGCGCCGCCGATCTCCTCCCCAGTTTCGTCGGCGCCGCCGCGGTGGCGAATAATTCCGATTTGCATTGGAAAGGGTCTTGCTTTTATGAGAATACTGCCTGGTTAGAGCTTCATAATAAAAGTGGTAGTCAGTTTGGTGGAGGCACTCTTCATATTAAAGTAAGCAGTGCACACAGTTGGACATGTATGGATATTTATCTATTTGCGACTCCATATCGTGTGACATGGGACTATTATTTTCTTTCCCGTGAGCATACACTCGAGTTTGATGAATGGAGCGGGAAAGCTGAGTACGAATATGTGAAACGTAAAGGAGTTGCAATTTTCCTGATGGAAGCAGGAATGATAGGAACCCTACAAGCATTATGGGAGGTCTTCCCGTTATTCACAAATACAGGTTGGGGGGAGAGTTCCAATCTTGCTTTTCTCAAGAAGCATATGGGAGCTAATTTTGAGGTGCGGCCCGAACCGTGGGTAACAAACATAACCGAAGACGATATTCATTCGGGGGACTTCCTTGCCATATCGAAAATCCGTGGTAGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCATACGCGGGTCACTCTGCTGTTTGCTTGAGGGACCCACAAGGTAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTACCATGGGATGAGTGGTGGGATTTTGAGTTGACTAAAGATGACGCAAATCCACATATTGCTTTGCTTCCTTTGCATCCCGATCTACGGTCCAGATTTAATGAAACTGCTGCTTGGGAGTATGCACAGAGTATGGTTGGGTTGCCGTATGGTTATCATAATTTGATATTTAGTTGGATAGATACCGTCAGTGATAATTATCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACTGTGTGGGATCAAATGCAGCCTGCATATGCGGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTCAGGGGCTTGAACTAGCTGAAATTTTAGTGGAAGTTGAAAGACGTGGTTCATCTTTTGCAGAATTACTAACTATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAATCAACTTCTTGTGTTGCTTTCGTCCTTGAAATGTACAAAGAAGCAGGACTCTTTGGAGATCTTGCAGACCAAATTCAAGTTACCGAATTCACAATAAAGGATGCTTACACGCTTAACTTTTACGAAAACAATTCAAGCCGCCTGCCAAAGTGGTGCAATGAAGGCGACACGGTTGAACTTCCATTTTGTCAAATTAAAGGAAAATATCGAATGGAGTTACCTGGATACAATACCATTGAACCGTACCCGCATATGACCGAAAGATGCCCATCACTACCCCCAGATTATTCAAGACCCCAGTACTGCTGA 1614 44.36 MAPLSSSSSSSSSFSKTHFTITLLILLTCILNPNVQALKAPIHPQDILPLLPHQISWPLLNSLRGAADLLPSFVGAAAVANNSDLHWKGSCFYENTAWLELHNKSGSQFGGGTLHIKVSSAHSWTCMDIYLFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKRKGVAIFLMEAGMIGTLQALWEVFPLFTNTGWGESSNLAFLKKHMGANFEVRPEPWVTNITEDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWDFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTQGLELAEILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIEPYPHMTERCPSLPPDYSRPQYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu32g00956 537 PANTHER OS01G0793500 PROTEIN 16 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu32g00956 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
299229 Hetu31g00901 Hetu32g00956
301059 Hetu32g00956 Hetu33g01008
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr32:44415567 Hetu50g03617 Hetu-Chr50:209979410 dispersed
Hetu Hetu-Chr31:40666919 Hetu32g00956 Hetu-Chr32:44415567 wgd
Hetu Hetu-Chr32:44415567 Hetu33g01008 Hetu-Chr33:43127523 wgd